Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00034 ATGGCAACATTACAATCATCACTAGTGGCATTATTTATGGAGTCAGACTTTAATGCATGGAAGATTACTTTTCTACTTCAATTTGGTTGTGTTTTGTATTCAGGAGTCATGGGATCAGCAGTAACATTTTATCTCCAAGCATGGTGCATTTCTAGGAGAGGACCTTTCTTCTCTGCAATGTTCAGTCCTCTCTTAACATTGATTGTAACTATATTGGCTACCTTGTGGCTTCATGAAGAAATATACATTGGAAGCTTGATAGGTGCAATTGGAGTGATAGTTGGTTTGTATATTGTGATTTGGGGTAAAGCTGAAGATGTAGTTGATGTCAAAGATAAGAAAGAGAAAAAATTTGACAATGAATATTGTGAAAAAATAAATTGTAAAACTGATTTGGAAGATCCTCTTTTACACAACTAA 420 0.3429 MATLQSSLVALFMESDFNAWKITFLLQFGCVLYSGVMGSAVTFYLQAWCISRRGPFFSAMFSPLLTLIVTILATLWLHEEIYIGSLIGAIGVIVGLYIVIWGKAEDVVDVKDKKEKKFDNEYCEKINCKTDLEDPLLHN 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00034 139 SUPERFAMILY Multidrug resistance efflux transporter EmrE 19 103 - -
Vifa4g00034 139 PANTHER WAT1-RELATED PROTEIN 1 107 IPR030184 GO:0016020|GO:0022857
Vifa4g00034 139 Pfam EamA-like transporter family 2 100 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00034 Vifa-Chr4 5964165 5964781 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00034 2 137 Nodulin-like Gene Family AT4G30420 48.252 6.51e-42 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00034 - - psat:127138204 198.749