Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g05219 ATGCAACTCACAACTTCTCCAATGACTTGTTCATTCTTGATTCATTTCTTTGTATTATTTACTTTATGCTTCAAAGCAAAGGCTCTGATAAAGCTTCCTCCAAATGTTACAATTCCAGCAGTGATAGCATTTGGAGATTCAATCGTTGACTCAGGAAACAACAATCACCTCAAAACTTTGGTTAAATGTAACTTCCCTCCTTATGGCAAAGATTTTCAAGGTGGTGTTCCAACTGGTCGATTTTGCAATGGAAAAATTCCTTCAGACATTCTAGCTGAAGAATTGGGCATCAAAGGGTATGTACCTGCATATTTGGATCCAAATCTCAAATCAACTGATCTTCTTACCGGCGTAGGGTTCGCCTCAGGAGCATCAGGATATGATCCATTGACACCGAAAATTGCGTCGGTGATACCGTTATCTTCTCAACTAGACATGTTCAAAGAATACATAGGAAGGCTGAAAAACATGGTTGGAGAAGAAAGAACAAACTTCATCCTATCCAATAGTCTTTTTGTTTTGGTGGGAGGTAGTGATGATATTGCCAACACATATTTTATTGCTCATGCAAGATTACAATATGACATTCCTGCTTACACTGATCTTATGTCCAACTCAGCCACTAATTTTGTACAGGAAATATATAATCTTGGAGCTCGTAGAATTGCTGTACTAGGTGCACCACCAATTGGATGTGTGCCATCACAAAGAACTCTTGCTGGAGGGATAGTAAGAGAGTGTGCAGAAAAATATAATGATGCAGCAAAGTTATTCAATATCAAACTCTCAAATGAGCTTGATTCTCTAAGTCACAACTCACCTAATAGCAAGATAGTTTACATTGATGCTTACACTCCTCTACTTGATATCATTCTCAATTATCAAAAATATGGGTTCAAAGTTGTGGATAGAGGTTGTTGTGGCACAGGGAAACTAGAGGTTGCAGTGTTATGCAATCCTTTTGATACTACTTGCTCTGATGCTTCTGAATATGTGTTTTGGGATAGTTATCATCCTACTGAAGGAGCATATAGAAAGCTAGTAGATGCAATTCTTCAAAAATATTTTACCAGATTGTTATAA 1083 0.3749 MQLTTSPMTCSFLIHFFVLFTLCFKAKALIKLPPNVTIPAVIAFGDSIVDSGNNNHLKTLVKCNFPPYGKDFQGGVPTGRFCNGKIPSDILAEELGIKGYVPAYLDPNLKSTDLLTGVGFASGASGYDPLTPKIASVIPLSSQLDMFKEYIGRLKNMVGEERTNFILSNSLFVLVGGSDDIANTYFIAHARLQYDIPAYTDLMSNSATNFVQEIYNLGARRIAVLGAPPIGCVPSQRTLAGGIVRECAEKYNDAAKLFNIKLSNELDSLSHNSPNSKIVYIDAYTPLLDIILNYQKYGFKVVDRGCCGTGKLEVAVLCNPFDTTCSDASEYVFWDSYHPTEGAYRKLVDAILQKYFTRLL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g05219 360 Gene3D SGNH hydrolase 31 355 IPR036514 -
Vifa3g05219 360 PANTHER GDSL ESTERASE/LIPASE EXL3 19 350 - -
Vifa3g05219 360 FunFam GDSL esterase/lipase APG 30 356 - -
Vifa3g05219 360 CDD SGNH_plant_lipase_like 39 355 IPR035669 -
Vifa3g05219 360 Pfam GDSL-like Lipase/Acylhydrolase 41 351 IPR001087 GO:0016788
Vifa3g05219 360 SUPERFAMILY SGNH hydrolase 167 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g05219 Vifa-Chr3 1525341945 1525344826 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g05219 10 353 Pollen Coat Proteome AT1G75910 38.506 6.14e-73 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g05219 - - gmx:100777710 580.867