Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g05215 ATGGAATTTTCAATGAAGCTCCCTTCTTCTCATTCTTTTCTAACTTTAATTTCCACTATAATTCTCCACTTGATATTTTTCATTTCTCTTTGCTTTGAAGCAAATGCAAAAGTTGAACTTCCGGAAAATGTTTTAATTCCAGCATTGTTTGTGTTTGGAGATTCAATTATGGATACAGGAAATAACAACTTCAAAAAAACAATAACTCGATGCGATTTTGCACCATATGGAAAAGATTTTCCTGGAGGAGTTGCGACTGGTCGATTTAGCAATGGAAAAGCTCCATCAGATATTATAGCTGAAGAATTAGGTATTAAAGAATTTCTACCTCCATATTTGGATCCAAAACTCAATGCTACTGAATTGGCAACTGGTGTGTGTTTTGCTTCAGGTGGTTCTGGCTTCGATCATGTTACATCAAAATTGTTGAATGCAATACCTTTATCAAGCCAATTGGACTCATTCAAAGAATATATTGAGAAGGTTAAAGTATCTGTTGGAGAAAATAGAACAAATGAAATTTTAGTGAATAGTATTTTTATTGTGGTGTTTGGTAGCAATGACATTTCCAACACATATTTCTTAACTCGTTTGAGAAAAATTAAATATCCTAAATTTTCTGATTATGCTGACCTTTTGGTTAGTATAGCTTCCAACTTCACAAAGGAAATATACCAACTAGGGGCAAGGAGAATCGGAATATTCAATGTGCCGCCGCTAGGGTGTGTTCCGATGCAGAGGACGGTGGCGGGAGGACCCGAAAGAAAATGTGTTGAAGAATACAATAATGCAACAGTGTTGTTTAATGATAAGTTATCCAATCAAATCGATTCATTAAAAACTGACTTATCCGATAGTAAAATTGTTTATATAGATATTTACAGTCGCACACTCGATGTCATTGTGAATAGTCAAAATTATGGGTTTGTAAATGAAGACAAAGGGTGTTGTGGCACTGGAAAATTAGAAGTTGGATTTTTATGTAACCGTTTTGGATCCATTTGCTCAAATGCCTCAGAACATGTGTTTTGGGACAGTTTTCATCCCACTGAAATCTTTTACAAAATCACTATACCCCCTCTACTCAAAAATTATATGAGCCAATTTTTTTGA 1113 0.3459 MEFSMKLPSSHSFLTLISTIILHLIFFISLCFEANAKVELPENVLIPALFVFGDSIMDTGNNNFKKTITRCDFAPYGKDFPGGVATGRFSNGKAPSDIIAEELGIKEFLPPYLDPKLNATELATGVCFASGGSGFDHVTSKLLNAIPLSSQLDSFKEYIEKVKVSVGENRTNEILVNSIFIVVFGSNDISNTYFLTRLRKIKYPKFSDYADLLVSIASNFTKEIYQLGARRIGIFNVPPLGCVPMQRTVAGGPERKCVEEYNNATVLFNDKLSNQIDSLKTDLSDSKIVYIDIYSRTLDVIVNSQNYGFVNEDKGCCGTGKLEVGFLCNRFGSICSNASEHVFWDSFHPTEIFYKITIPPLLKNYMSQFF 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g05215 370 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 49 60 IPR008265 GO:0006629|GO:0016298
Vifa3g05215 370 Pfam GDSL-like Lipase/Acylhydrolase 49 356 IPR001087 GO:0016788
Vifa3g05215 370 Gene3D SGNH hydrolase 39 363 IPR036514 -
Vifa3g05215 370 FunFam GDSL esterase/lipase APG 38 366 - -
Vifa3g05215 370 CDD SGNH_plant_lipase_like 47 356 IPR035669 -
Vifa3g05215 370 PANTHER GDSL ESTERASE/LIPASE EXL3 28 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g05215 Vifa-Chr3 1524086520 1524088148 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g05215 16 364 Pollen Coat Proteome AT1G75910 39.205 6.40e-74 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g05215 - - gmx:100777186 431.024