Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g05183 ATGACTGTATCTTCTTCTCTTTCTCTCCCTCACTTCCATTCCTCCTTTCTTTCTTCCCCTCTCAAATCTTTCTCTCCCACTCCATCCTCTAGAAATTTCATTATTCAACCAAAACCTACATTTTATCCACGTATTAGAGCTCTTGAACTTGATCAAAACACGGTTATAGCTATAACTGTTGGTGTTTTGAGTGTGGCTGTTGGAATTGGCATTCCAGTGTTCTATGAAACACAAATTGATAATGCAGCTAAGAGAGATAACACACAGCCATGCTTCCCATGCAATGGATCTGGAGCTCAGAAATGCAGATTTTGTTTGGGAACTGGCAATGTGACAGTTGAACTTGGTGGGGCTGAGACGGAGGTTTCTCGTTGTATAAACTGTGATGGTGCTGGTTCACTGACATGCACAACTTGTCAAGGTTCAGGAATTCAACCTCGTTACCTTGACCGTAGAGAGTTCAAGGATGATGACTGA 477 0.4214 MTVSSSLSLPHFHSSFLSSPLKSFSPTPSSRNFIIQPKPTFYPRIRALELDQNTVIAITVGVLSVAVGIGIPVFYETQIDNAAKRDNTQPCFPCNGSGAQKCRFCLGTGNVTVELGGAETEVSRCINCDGAGSLTCTTCQGSGIQPRYLDRREFKDDD 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g05183 158 Pfam Family of unknown function (DUF5351) 102 133 IPR035272 -
Vifa3g05183 158 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 15 154 - -
Vifa3g05183 158 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 85 145 IPR036410 -
Vifa3g05183 158 Gene3D - 79 147 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g05183 K22520 - gmx:100815666 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g05183 3 1514226945 1514227953 Vifa3g05183 3 1514226945 1514227953 ECH