Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g05101 ATGGGTGTGTTTGAAGAAACCATTCAATATCCTATTGCTCGTAGAGATGACTCCGTTGTTGACAACTATCACGGCGTTAACATTCCCGACCCTTACCGATGGCTGGAGAATCCTGATGCAGAACAAGTCAAAGAGTTTGTACAAAAACAGGTTGGTTTAACGGACTCAGTGTTGAAGACAATCGATGTTAGAGCTAAACTTGGTGATACGATAAAAAAGGTCTATGATCATCCCCGTTATAGCGCTCCTTTTAAAAGAGCTCATAAATACTTTTACTTCCATAATACCGGTCTTCAATCTCACTGCGTCCTTTATGTTCAGGATAGTTTGGAGGGTGAAGCAGAGGTTTTGCTTGATCCCAATGTTCTTAGTGAAGATGGCACCGTTTCCATTAATAGCTTCTCTGTTAGCAAAGATGCTAAGTTTTTGGCTTATGGACTCAGTTCTAGTGGTAGTGATTGGGCCACTATAAAGGTCATGCGTGTTCATGACAAAGTTGTTCAACCAGATACTTTGTCCTGGGTCAAGTTTTCTTCTACTAGTTGGACACATGATAACAAAGGTTTCTTTTACAGCCGCTTTCCGCCTCCAACTATTAAGGATGGAGAAGTAGTACATGCTGGGACTCAGACTGATACTAATCTTTATCATGAGCTATGTTATCATTTTCTCGGTACTCATCAATCACAAGATATCCTATGCTGGAGAGATCCTCACAACCCTAGATATATGTTTGATGGAACTGTCACTGATGACGGAAAGTATGTTATTCTGATCATTGGAGAGGGGTGTGATCCAGTCAATAAAATATATTACTTCCACTTGTCCAAACTTCCTAATGGTTTGGAAGGTTTTCGAAATGAAAAATCCTTCCTCCCTTTTGTCAAGCTTGTTGATCAATTTGATGCAAGTTATGAAGCTGTTGCAAATGATGACACTGTTTTTACATTTTTAACGAATAAAGATGCTCCAAAATATAAACTAGTCCGGGTAGATTTGAAAGAACCAATTACTTGGATTGATGTTATCCCAGAATCTGAAACAGGTGTACTCAAGTCAGCATTTGCTGTAAATGGTAACCAACTGATAGTGAGCTACTTGAGAGATGTGAAATATGTTCTGCAAGTAAGAGACTTAGAAACAGGTTCCCTGCAGCATCAAATACCAATTGACATAGGCACAGTTAGTGAGATTTCTGCACGGCGTCAAGATAATGTGGTTTTCATTGGCTTTTCAAGCTTTTTGACTCCTGGTATCATATATCAGTGCAACCTGGGGGGAACACAGATTCCTGATATAAAGATATTTCGTGAGATTGAGGTCCCTGGGTTTGATCGCTCAGAATTTCAGGTCAATCAGGTTTTTGTGCCTAGTAAAGATGGAACGAAGGTGCCGATGTTCATTGTTGTGAGAAAGAATATAACTTTGAATGGTTCACACCCTTGTTTGTTATACGGATATGGCGGTTTTAACATCAGTCTTACACCATATTTCAATGTGAGTCGTATTGTCATTGCAAGACATTTAGGTTCTGTTTTCTGCTTAGCAAATATTCGCGGTGGTGGAGAATACGGAGAAGAGTGGCATAAAGCAGGAGCCCTTTCAAAAAAGCAAACATGCTTTGACGACTTCATTTCTGCAGCTGAATACCTTGTATCTGCCGGTTATACCCAACCCAAAAAGTTATGCATTGAAGGTGGAAGCAATGGTGGACTTGTTGTTGGTGCTTGTATTAATCAGAGACCTGATCTTTTTGGTTGTGCATTGGCTCATGTCGGTGTTATGGACATGTTACGGTTCCACAAATTCACTATAGGTCATGCTTGGACCACAGAATTTGGCTGTTCTGACAAGGAGGAAGAATTTCATTGGATAATCAAGTACTCGCCATTGCATAATGTCTGGAGACCATGGGAACAAGATCCAAATAAGTCAATTCAGTATCCATCAACAATGCTATTGACAGCTGATCATGACGATCGTGTTGTGCCATTGCATTCATTGAAGCTATTGGCGACCTTGCAGCATGTCCTTGTGACTAGCCTGGATAAAAGTCCTCAGACGAATCCTATAATTGCTCGAATTGAATGCAATGCTGGACATGGAGCTGGGCGTCCCACACAGAAAATTATTGATGAAGCAGCTGATCGGTATGGTTTTATGGCAAAGATGTTAGAGGCTCATTGGATTGAGTAG 2196 0.4053 MGVFEETIQYPIARRDDSVVDNYHGVNIPDPYRWLENPDAEQVKEFVQKQVGLTDSVLKTIDVRAKLGDTIKKVYDHPRYSAPFKRAHKYFYFHNTGLQSHCVLYVQDSLEGEAEVLLDPNVLSEDGTVSINSFSVSKDAKFLAYGLSSSGSDWATIKVMRVHDKVVQPDTLSWVKFSSTSWTHDNKGFFYSRFPPPTIKDGEVVHAGTQTDTNLYHELCYHFLGTHQSQDILCWRDPHNPRYMFDGTVTDDGKYVILIIGEGCDPVNKIYYFHLSKLPNGLEGFRNEKSFLPFVKLVDQFDASYEAVANDDTVFTFLTNKDAPKYKLVRVDLKEPITWIDVIPESETGVLKSAFAVNGNQLIVSYLRDVKYVLQVRDLETGSLQHQIPIDIGTVSEISARRQDNVVFIGFSSFLTPGIIYQCNLGGTQIPDIKIFREIEVPGFDRSEFQVNQVFVPSKDGTKVPMFIVVRKNITLNGSHPCLLYGYGGFNISLTPYFNVSRIVIARHLGSVFCLANIRGGGEYGEEWHKAGALSKKQTCFDDFISAAEYLVSAGYTQPKKLCIEGGSNGGLVVGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTTEFGCSDKEEEFHWIIKYSPLHNVWRPWEQDPNKSIQYPSTMLLTADHDDRVVPLHSLKLLATLQHVLVTSLDKSPQTNPIIARIECNAGHGAGRPTQKIIDEAADRYGFMAKMLEAHWIE 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g05101 731 Gene3D - 78 440 - -
Vifa3g05101 731 SUPERFAMILY alpha/beta-Hydrolases 449 704 IPR029058 -
Vifa3g05101 731 ProSitePatterns Prolyl endopeptidase family serine active site. 543 573 IPR002471 GO:0004252|GO:0006508
Vifa3g05101 731 Gene3D alpha/beta hydrolase 19 721 IPR029058 -
Vifa3g05101 731 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 11 426 IPR023302 GO:0004252
Vifa3g05101 731 PANTHER PROLYL ENDOPEPTIDASE 7 729 - -
Vifa3g05101 731 FunFam Prolyl endopeptidase 421 721 - -
Vifa3g05101 731 SUPERFAMILY Peptidase/esterase 'gauge' domain 7 442 - -
Vifa3g05101 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 648 670 IPR002470 GO:0004252|GO:0006508
Vifa3g05101 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 566 586 IPR002470 GO:0004252|GO:0006508
Vifa3g05101 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 508 532 IPR002470 GO:0004252|GO:0006508
Vifa3g05101 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 536 555 IPR002470 GO:0004252|GO:0006508
Vifa3g05101 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 481 499 IPR002470 GO:0004252|GO:0006508
Vifa3g05101 731 FunFam Prolyl endopeptidase 78 440 - -
Vifa3g05101 731 Pfam Prolyl oligopeptidase family 497 726 IPR001375 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g05101 Vifa-Chr3 1487046165 1487049291 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g05101 473 603 Carbohydrate Esterase AT5G36210 30.370 6.25e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g05101 K01322 - gmx:100812955 1256.12