Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g05084 ATGTCTCTCATCAAACTCGTTCTCTTCGTAACATTTTTCCTCTCATTTACATTCTCTCATGCTCATCCTCCAGGCTTCAACTTTGGCTGGGGTGGTCATCATCATCATGGTGGAATGTCCTTTGGTCTTTCTCCTCAATTCTATCAGTTTTCATGTCCTCAAGCTAATGACATTGTCATGTCAGTCTTGGAGAAGGCCATTGCTAAAGATATCAGAGTAGCCGCTTCTCTTCTTCGACTTCACTTCCACGATTGCTTCGTCCAGGGTTGCGACGCGTCAATTTTGTTGGATGATAGTGCGACGATTGCTAGTGAAAAAAATGGAGGGCCTAATAAAAATTCCCTTCGAGGTTTTCAAGTGATTGATGAGATCAAATCTAAATTGGAACAAACATGTCCTCATACGGTCTCTTGTGCAGACATTGTTGCACTTGCTGCTAGAGGATCCACTGTCCTTAGTGGAGGACCTAATTGGGAGTTACCTTTAGGAAGGAGAGACTCAAAAACAGCGAGCCTGAGGGGTTCAAACAAAAACATTCCTCCACCAAATGCCACCATTGAAGGACTCTTAACATTTTTCAAACGTCAAGGTCTTGATGAAGTAGACCTTGTTGCCCTCTCAGGTGCACATACAATTGGTGTAGCAAAATGTGCAACATTCAAGCAAAGACTATACAACCAAAATGGAAACAACCAACCAGATGAAAATCTAGAAAAGACATTTTACTTTGGTTTGAAAACAATGTGTCCAAAATCAGGTGGTGACAACAACATTTCTCCTTTAGATTTTGGTTCTCCAAGAATGTTTGATAACACATATTACAAACTCTTACTTAGAGGAAAAGGATTACTTAATTCAGATGAAGTGCTTGTCACCGGAAATGTTAGGGAAACTCATGAATTGGTGAAGAAATATGCACAAGATGAGAGTCTCTTCTTTGAGCAATTTGCATTGTCGATGATCAAGTTGGGAAATCTTCGTCCTCTTACTGGATTTAATGGTGAAGTTAGAAAGAATTGCCATCGAGTTAATTAA 1035 0.401 MSLIKLVLFVTFFLSFTFSHAHPPGFNFGWGGHHHHGGMSFGLSPQFYQFSCPQANDIVMSVLEKAIAKDIRVAASLLRLHFHDCFVQGCDASILLDDSATIASEKNGGPNKNSLRGFQVIDEIKSKLEQTCPHTVSCADIVALAARGSTVLSGGPNWELPLGRRDSKTASLRGSNKNIPPPNATIEGLLTFFKRQGLDEVDLVALSGAHTIGVAKCATFKQRLYNQNGNNQPDENLEKTFYFGLKTMCPKSGGDNNISPLDFGSPRMFDNTYYKLLLRGKGLLNSDEVLVTGNVRETHELVKKYAQDESLFFEQFALSMIKLGNLRPLTGFNGEVRKNCHRVN 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g05084 344 PRINTS Plant peroxidase signature 135 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g05084 344 PRINTS Plant peroxidase signature 276 293 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g05084 344 PRINTS Plant peroxidase signature 260 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g05084 344 PRINTS Plant peroxidase signature 76 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g05084 344 PRINTS Plant peroxidase signature 116 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g05084 344 PRINTS Plant peroxidase signature 52 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g05084 344 PRINTS Plant peroxidase signature 201 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g05084 344 PRINTS Plant peroxidase signature 318 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g05084 344 PRINTS Plant peroxidase signature 154 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g05084 344 PRINTS Haem peroxidase superfamily signature 262 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g05084 344 PRINTS Haem peroxidase superfamily signature 202 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g05084 344 PRINTS Haem peroxidase superfamily signature 136 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g05084 344 PRINTS Haem peroxidase superfamily signature 74 88 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g05084 344 PRINTS Haem peroxidase superfamily signature 154 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g05084 344 ProSiteProfiles Plant heme peroxidase family profile. 42 344 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g05084 344 FunFam Peroxidase 46 186 - -
Vifa3g05084 344 FunFam Peroxidase 180 323 - -
Vifa3g05084 344 ProSitePatterns Peroxidases active site signature. 74 85 IPR019794 GO:0004601
Vifa3g05084 344 PANTHER PEROXIDASE 72-RELATED 42 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g05084 344 Gene3D - 47 344 - -
Vifa3g05084 344 CDD secretory_peroxidase 42 343 IPR033905 GO:0004601|GO:0042744
Vifa3g05084 344 Gene3D Peroxidase, domain 2 180 324 - -
Vifa3g05084 344 Pfam Peroxidase 61 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g05084 344 ProSitePatterns Peroxidases proximal heme-ligand signature. 202 212 IPR019793 -
Vifa3g05084 344 SUPERFAMILY Heme-dependent peroxidases 42 344 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g05084 Vifa-Chr3 1481948184 1481949764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g05084 6 344 Peroxidase AT1G44970 74.118 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g05084 K00430 - gmx:100795020 571.237