Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g05062 ATGGGTTCTCTTATGGCAGGATGGGGTTCTTCCTCCATTGATCCTAAATCAGCCACACTTAAAAGGAATCTGTCACTTACTAAAAATGAAATTGATGCTTATTGGAAATCAAAGAAGAAGACAGAGGAAGAACACTTTAGAGCCATTTCCAATCTGTCTGAGACTATTGATCAGGTTAGCAAAGATAATGATCCAGAAAAGAAGCTTCAGAATTCAATGACTATGCCTGTGACCAACATAAGGGACTCTTTTAATATGAACATACTTGACACAAATTTGGAGCAACTTATCAACAAAAATGGCTGGTGGACAAAGAGTAGTTGGGCATTTCTGAATGAGCCACCATTGATGGAAGCTGCGTCTAACAAGTATGCAGCTCAGTTTCATGTTGCCAATTTGGGACCATCCAAATTGAACCCAGAAGAAGATGAAATTAGTGCTTGA 444 0.3896 MGSLMAGWGSSSIDPKSATLKRNLSLTKNEIDAYWKSKKKTEEEHFRAISNLSETIDQVSKDNDPEKKLQNSMTMPVTNIRDSFNMNILDTNLEQLINKNGWWTKSSWAFLNEPPLMEAASNKYAAQFHVANLGPSKLNPEEDEISA 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g05062 147 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 1 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g05062 Vifa-Chr3 1475079918 1475080609 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g05062 - - gmx:100798264 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g05062 3 1475079918 1475080609 Vifa3g05062 3 1475079918 1475080609 ECH
Vifa3g05062 3 1475079918 1475080609 Vifa2g04395 2 1290491501 1290492123 PCT