Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g05050 ATGGAACCAGGAACTTCTTCTTACAAGATTATATTGGGTTCTTCCTCCATCGCACGCCGCAAGATTTTGTCCGAAATGGGATACCAATTCACATTAATGACGGCAGATATTGATGAAAAGAGCATCCGAAAAGATACTCCAGAAGAGTTAGTTATGGCTCTTGCTGAAGCCAAGGCCAACGCCATTATTTCCAAACTTCAAACTACCGGTAATCAAGAGAGAGTTGATGAACCGACGCTTTTAATTGCTGCTGACACAGCAGAAGCCATCTTACAGAGGCTCCCTGTTGGTGACTATTTAAAGGATGCCGAGCCAACTTTATTAATCACTTCTGACCAAGTGGTGGTCTATGAAGGTGTGATTAGGGAAAAGCCATCTAGCAAACAAGAAGCTCGACAATTCTTGAAAGATTATTCTGGAAGGAAAGCAGCAACCGTGGGATCTGTATTAGTTACTAATCTTAAAACAGGATTGAGAAAAGGAGACTCAGATCGTGTTGAGATCTATTTCAATGAAATACCTGATGAAATCATTGAGAAGCTGGTTGATGAGGGAATTACTCTCAACGTTGCTGGAGGGCTAATAATAGAGCATCCTTTAATATTTCCATATGTCAAAGATGTGGTAGGCACAACTGATAGTGTGATGGGGCTTCCCAAAGATCTGACTGAAAAACTCTTAAACGCAGTCCTATAA 696 0.4109 MEPGTSSYKIILGSSSIARRKILSEMGYQFTLMTADIDEKSIRKDTPEELVMALAEAKANAIISKLQTTGNQERVDEPTLLIAADTAEAILQRLPVGDYLKDAEPTLLITSDQVVVYEGVIREKPSSKQEARQFLKDYSGRKAATVGSVLVTNLKTGLRKGDSDRVEIYFNEIPDEIIEKLVDEGITLNVAGGLIIEHPLIFPYVKDVVGTTDSVMGLPKDLTEKLLNAVL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g05050 231 Pfam Maf-like protein 9 229 IPR003697 GO:0047429
Vifa3g05050 231 PIRSF Maf 87 231 IPR003697 GO:0047429
Vifa3g05050 231 PIRSF Maf 3 94 IPR003697 GO:0047429
Vifa3g05050 231 PANTHER BIFUNCTIONAL DTTP/UTP PYROPHOSPHATASE/METHYLTRANSFERASE PROTEIN-RELATED 6 86 IPR003697 GO:0047429
Vifa3g05050 231 Hamap dTTP/UTP pyrophosphatase. 9 231 IPR003697 GO:0047429
Vifa3g05050 231 SUPERFAMILY ITPase-like 8 228 IPR029001 -
Vifa3g05050 231 Gene3D - 89 229 IPR029001 -
Vifa3g05050 231 Gene3D - 3 88 IPR029001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g05050 Vifa-Chr3 1471152045 1471156687 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g05050 - - var:108338050 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g05050 3 1471152045 1471156687 Vifa3g05050 3 1471152045 1471156687 ECH