Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04999 ATGGGGAACCAACTAATTTGTAAAAGAAGAAAATTAAGGTCGAAGAGAAGGCCAACTGGTTTTGTTCATCATCAAACGTCGCACTCTCATGTTGGAATAAGAACTGTTGGTGTTGATAAAGCATGTAACTTCACCACTCCAAATCTCTGCATCTCTATAGTCACATGGAATATGAATGGCCAGGTTTCCTTTGAAGATTTAGCTGACATGGTTGGTGGAAACCATGACTTCGATCTTCTTGCTGTTGGCTTGCAAGAAGCTCCAGGAAAAAAAGTTGCAACTATGCTTTCAACAGCTTTGGATGAAACTCACACCCTAATAGGTAAAGTTACAATGCAATCTTTGCAGTTGTTCTTGTTTGGATCAAAGAATGCAGGATCATTCATTCAAGAATTGAAGGTGGACAAACAATCTATTGGGGGATGTGGAGTAGTAATCGGTAGAAAGAAAGGCGCGGTAGCCATTCGTATTAACTACAAAGGAATACGTATGGTGTTCATCTCCTGTCACCTCTCCGCTCATGGTTGCAATGTGGAAGAAAGAAATGCTGAATGCAGGCATATATCACACACTCTCTTCTCTAAGAATTGGAATCCATATTCTAGACCATCTCATGTGACAATTTGGTTAGGAGATCTCAACTATAGGCTTCAAGGGATTGATACATACCCGGCTAGGAACCTAATAGACAAAGACCTTCACTATGAGCTGCATGGTAATGATCAACTCTTGCAACAAGCTGCAGAAGGACAAATTTTCAATGGATTTTGTGAGGGGACATTGACATTCAAGCCAACATATAAGTATAATAAAGGAAGTAGCAATTATGACACAAGTTACAAGGTTCGAGTACCAGCATGGACAGATCGTATACTGTTCAAGATAGAAGACTCAGACAACATAGAAGTAACCCTACATTCTTACGAGTCGTTGGATCAAATATATGGTTCTGATCATAAGCCAGTAAAGGCACATATCTGCTTAAGACTACGTCAACATCAAACTGAATCCTAA 1014 0.3974 MGNQLICKRRKLRSKRRPTGFVHHQTSHSHVGIRTVGVDKACNFTTPNLCISIVTWNMNGQVSFEDLADMVGGNHDFDLLAVGLQEAPGKKVATMLSTALDETHTLIGKVTMQSLQLFLFGSKNAGSFIQELKVDKQSIGGCGVVIGRKKGAVAIRINYKGIRMVFISCHLSAHGCNVEERNAECRHISHTLFSKNWNPYSRPSHVTIWLGDLNYRLQGIDTYPARNLIDKDLHYELHGNDQLLQQAAEGQIFNGFCEGTLTFKPTYKYNKGSSNYDTSYKVRVPAWTDRILFKIEDSDNIEVTLHSYESLDQIYGSDHKPVKAHICLRLRQHQTES 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04999 337 Pfam Endonuclease/Exonuclease/phosphatase family 54 294 IPR005135 GO:0003824
Vifa3g04999 337 Gene3D Endonuclease/exonuclease/phosphatase 35 337 IPR036691 -
Vifa3g04999 337 FunFam Type IV inositol polyphosphate 5-phosphatase 11 30 335 - -
Vifa3g04999 337 PANTHER INOSITOL 5-PHOSPHATASE 39 332 IPR046985 GO:0046856
Vifa3g04999 337 SMART i5p_5 47 334 IPR000300 GO:0016791|GO:0046856
Vifa3g04999 337 SUPERFAMILY DNase I-like 44 330 IPR036691 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04999 46 330 Acyl Lipid Metabolism Gene Families AT2G43900 28.451 4.56e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04999 - - mtr:11414545 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04999 3 1454230440 1454252684 Vifa3g04999 3 1454230440 1454252684 ECH