Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04969 ATGGATCCCAATCAACATAACTCTTGGTCTAATTTTATGCAAAATGGTGGTATTCTTCCTTCAATTCCAAATCAACAAAGCAACTCATACATCGGAAATGTACCTCTTATCTCAAATTCAAACCATAACCCAAATTTTCAAAACTCTCATTTTATCCCAAATTCACAAAATAATCCCCACTTTGGAAATTACTCATATCATACTCCACCTTATCCATATCAATATCAACAACTTACATCTCAACCAACTAACCCCATTATTCCTCATGTGGCTCAAATAGGCAGTAGTGAAGTTGCATCTGCACCGGTTGCGAAAACGCCTAAAAAAAGGTTCCAACAAAAAGAGGATGACGTTCTCATTCAATCATGGCTCAACGTTTCAAAGGATTCAATTGTTGGGGTTGATCAAAAAGGAGATAGTTTTTGGAACAGGATTGGCAAAGCTTACAACAAGCATCGTGACACCAATTACAAAGAGAGGAAACCGATGTCACTTAAAGGTCGATGGCACAAAATTAATCCATCTGTTCAAAAGTTTGTTGGATGCTACAAACAAGCTGTGTCTACACAACAAAGTGGGAGCTTCGAGAGCAATATCATGCAAGCTGCATATAAAATTTATTTTCAAGATGAAGGTGAAAAGTTTATATTTGAGGCTGCATGGAGATTATTGAAAGATGAACCTAAATGGCTCGCGGGTTCATCGGAAGCTTCTACAAAAAGAACAAAGAATTCAGCTTCAGGAGCATATTCTTCATCTTCTAATCCACCGACACCAACGAGTAGCGGATACAATCCACCATCGCCTACTTTGTCACGTCGTCCAATCGGTCAAAAGGCAACCAAAATGAAAGAGAAGGAAAAGTTTATGGAAATGTCAAATATGAGTCTTTGA 894 0.3803 MDPNQHNSWSNFMQNGGILPSIPNQQSNSYIGNVPLISNSNHNPNFQNSHFIPNSQNNPHFGNYSYHTPPYPYQYQQLTSQPTNPIIPHVAQIGSSEVASAPVAKTPKKRFQQKEDDVLIQSWLNVSKDSIVGVDQKGDSFWNRIGKAYNKHRDTNYKERKPMSLKGRWHKINPSVQKFVGCYKQAVSTQQSGSFESNIMQAAYKIYFQDEGEKFIFEAAWRLLKDEPKWLAGSSEASTKRTKNSASGAYSSSSNPPTPTSSGYNPPSPTLSRRPIGQKATKMKEKEKFMEMSNMSL 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04969 297 PANTHER - 95 291 - -
Vifa3g04969 297 Pfam No apical meristem-associated C-terminal domain 214 287 IPR029466 -
Vifa3g04969 297 MobiDBLite consensus disorder prediction 235 275 - -
Vifa3g04969 297 MobiDBLite consensus disorder prediction 232 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04969 Vifa-Chr3 1443898179 1443899153 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04969 82 287 Glutathione S-transferase Gene Family AT5G41240 35.909 7.12e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04969 - - mtr:11446189 228.409