Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04957 ATGGAAGCTAAGGAACAAGATGTGTCCTTGGGAGGCAACAAGTTTCCAGAGAGACAGCCACTTGGGATTGCGGCTCAGAGCCAAGACGATCCAAAGGACTATCAAGAGCCACCACCGGCACCACTTTTTGAGCCGTCGGATCTCACTTCATGGTCTTTCTACAGAGCCGGGATAGCCGAGTTCATAGCCACTTTCCTTTTCCTGTATATAACCGTTTTAACCGTTATGGGTGTTGTTCGGGAAAGTTCCAAATGCAAAACGGTTGGTATTCAAGGAATCGCTTGGGCTTTTGGTGGCATGATCTTCGCTCTTGTTTACTGCACCGCTGGAATCTCAAGAGGTCATATAAATCCTGCTGTGACGTTTAGGCTATTTTTGGCGAGGAAATTATGGTTACCAAGAGCACTATTCTACATGGTGATGCAAGTGTTGGGTGCTATTTGTGGTGCTGGTGTGGTGAAAGGTTTTGAAGGTAAACAAAGGTTTGGAGATCTGAACGGTGGTGCCAACTTTGTTTCTCCTGGTTACACCAAGGGTGATGTTCCTTGTGAGAATTCACTATTAAGGCAAGTGTCGAGTCTCCTGAGAAGATTACCTGCTATTGAATCTGGGAAATTTCAAGATGATTTCTTGATGGAATACAATGACACCTTGTTGATTAGTTACCTTGCCATGCTGACCAACTGCTCAAGTGCAATGAATGATTCGGTGGACAAGTTCGGTACCGCATATGATAGACATACCAGAAGAGATGGACGAACCGCTTTCATGTGA 774 0.4522 MEAKEQDVSLGGNKFPERQPLGIAAQSQDDPKDYQEPPPAPLFEPSDLTSWSFYRAGIAEFIATFLFLYITVLTVMGVVRESSKCKTVGIQGIAWAFGGMIFALVYCTAGISRGHINPAVTFRLFLARKLWLPRALFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVSPGYTKGDVPCENSLLRQVSSLLRRLPAIESGKFQDDFLMEYNDTLLISYLAMLTNCSSAMNDSVDKFGTAYDRHTRRDGRTAFM 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04957 257 SUPERFAMILY Aquaporin-like 48 170 IPR023271 -
Vifa3g04957 257 Pfam Maintenance of mitochondrial structure and function 178 237 IPR024969 -
Vifa3g04957 257 MobiDBLite consensus disorder prediction 1 39 - -
Vifa3g04957 257 PRINTS Major intrinsic protein family signature 97 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vifa3g04957 257 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vifa3g04957 257 PRINTS Major intrinsic protein family signature 134 153 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vifa3g04957 257 Gene3D Glycerol uptake facilitator protein. 40 240 IPR023271 -
Vifa3g04957 257 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 13 180 IPR034294 -
Vifa3g04957 257 Pfam Major intrinsic protein 48 179 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04957 Vifa-Chr3 1437365203 1437365976 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04957 1 180 Major Intrinsic Protein MIP AT4G00430 76.667 1.31e-95 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04957 K09872 - gmx:100775766 315.079