Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04904 ATGCGTGGATTGCAAAAATCGAAGCGAGTTTCATGGGCTTCGGATTTGAATCTCTGTCAGGTTAGGTTATTCTTATCAGAGGAATCTCCTTCACAAGTTGGGTTGAACTCTCAAGATCACCTCCAAGCAAAGATATCATCCGTGTTGCATCAAGGAGAAGCTGGTTCTGATGATATTTTGCCTCCTGGGTTCGAAGGAACTTGTGCTTCAAGGCAGTCTGACATTAAGCTGTCCCAAATACCAGTTATTAGCTGGGTTAATCCACCTAAGATTGTGCTAAATGTCACATGGCTAGTGGTGGCTGGGGAAGAAAGCAAAGAAATAGTTGATCAACCGCACAGGGAGATGAGAGTTCTTGAGGCTATATATCCACGAATATCTTCCATTCCTCCAAATCCTTCTGTTCCATTGAACGTTGAAGATTCTCATTACATGGACGATCACACTGTTGTGATCCCAATTACACCCGTTGAAGATGGGGATATGGCAGCAGATATATTATCTCATTCCTTGAAACGTTACGATGTTTCACAGTCTCATGAATTATCTCCTGGTATATTTGAGGGTTCAAACTCTGCTGCAAGTATGTCTGATGTAGTTGCTGCATCTGCTGCTTTAACTAGCATAGTAAAGAGCAGCGAACATGGTAATTTGATAGACCGTGAATTACTCAATAACATTCTCAACAATCCTGAAGTGATTGAGAAGTTAGTTAGAGATTATGGAGTTCAGAATAATGCACAGTATGTACAAAACATGGGAGGATCATCTTCCGGAGTTTTTTCACATCCTACTAATCGCATTCATCAAGTGGAAACCACTACAACCTCATCAAATCCCTTTTTATCCACTTCTTCCTATACTCACACAAACGGTGCTCCGGTGGCGGCAAATATTCCTACTCAATGGCATTCTAGGCCTGTAATGAGTTCAGCTATTGCTGCTACTCCTGTTGACACCCCTTCAACAAAAGATGTAAACTATTACAAGAGCTTGATTCAACAACATGGAGGAGATAAACAAGAAGCACTTCCATACTCCTCCAGTAATCGTCAGAACCAGCAGCCATTATCAAACTACGAGACGGTACACAATTTTAGAGCAAAGGGGTCAAAGCCAAAGATAATGAAGCCTTGTATCTTTTTCAATAGTTCCAGAGGATGTCGGAATGGAACTAACTGTACCTTTCAGCATGATGCATCTTTTCAGCAACAGGGTAATGCTGTCTCAGGGATGCAAAGTTCAAAGAGAATGAAAATGGACAATGAGATCAGCAGTTAA 1281 0.4137 MRGLQKSKRVSWASDLNLCQVRLFLSEESPSQVGLNSQDHLQAKISSVLHQGEAGSDDILPPGFEGTCASRQSDIKLSQIPVISWVNPPKIVLNVTWLVVAGEESKEIVDQPHREMRVLEAIYPRISSIPPNPSVPLNVEDSHYMDDHTVVIPITPVEDGDMAADILSHSLKRYDVSQSHELSPGIFEGSNSAASMSDVVAASAALTSIVKSSEHGNLIDRELLNNILNNPEVIEKLVRDYGVQNNAQYVQNMGGSSSGVFSHPTNRIHQVETTTTSSNPFLSTSSYTHTNGAPVAANIPTQWHSRPVMSSAIAATPVDTPSTKDVNYYKSLIQQHGGDKQEALPYSSSNRQNQQPLSNYETVHNFRAKGSKPKIMKPCIFFNSSRGCRNGTNCTFQHDASFQQQGNAVSGMQSSKRMKMDNEISS 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04904 426 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 280 422 - -
Vifa3g04904 426 MobiDBLite consensus disorder prediction 405 426 - -
Vifa3g04904 426 SUPERFAMILY CCCH zinc finger 378 405 IPR036855 GO:0046872
Vifa3g04904 426 ProSiteProfiles Zinc finger C3H1-type profile. 373 401 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04904 Vifa-Chr3 1422966111 1422970236 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Vifa3g04904 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04904 - - cam:101501814 667.537