Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04869 ATGCAGATTTTCAAGTCTCTTCAAATTATTCTGCTGCTCATATTCTGCAGCAGACACACAACAGCGCAAACCAAAAACACATACATAATTCATATGGACAAATCCACCATGCCAGAAACATTCACCGATCACGTTAATTGGTTCGACACATCATTAAAATCAGTATCAGAAACAGCAGAGATTCTCTACACTTACAAACACATAGCTCATGGATTCTCCACAAGATTAACTCATCAAGAAGCTGAAACACTTTCAAACCAACCAGGAATTCTCTCTGTTATCCCTGAACTCAGATATGAACTTCACACAACAAGAACACCACAGTTCCTTGGTTTGCCACAAACCAACACTCTTTTACCTCAGTCTAAACAACAGAGTCAGGTGATTATTGGTATTCTTGACACTGGTATTTGGCCAGAGACAAAAAGCTTAGATGACACAGGACTTGGTCCAATCCCAAGTAGTTGGAAAGGCACATGTGAAACCGGTAACAACATGAACTCGTCAAACTGCAACAGAAAACTCATAGGCGCCAGGTTTTTCGCTAAAGGGTATGAAGCAGCACTTGGTCCTATAGATGAAACAACAGAATCAAGATCACCTAGAGATGACGACGGACATGGAACTCACACGTTAACAACAGCCGCAGGTTCTGTTGTAGCAGAAGCTAGCTTATTCGGATTAGCTTCTGGTACAGCAAGAGGCATGGCTACACAAGCACGTGTAGCAGCTTACAAAGTCTGTTGGACTGGTGGTTGTTTCACTTCTGACATAGCTGCCGGAATGGATAAAGCCATTGAAGACGGTGTTAACATCTTATCAATGTCAATCGGTGGTAGCTTAACAGAATATTACAGAGACATCATCGCAATCGGAACTTTCAGCGCAATGTCTCATGGAATTCTAGTCTCATCATCAGCTGGAAACGGTGGACCAAGTGCCGAAAGCTTATCAAACGTAGCACCGTGGATAACAACAGTCGGAGCCGGAACAATAGACCGCAACTTTCCCAGTTACATAACACTTGCAAACGGAAAAAACTACACCGGTGCATCACTTTACAACGGAAAACCGTTACCCGATTCATTCCTACCACTTGTTTATGCAGGAAATGTAAGCAACTCCGCAGTTGGGTATCTTTGTATACCTGATTCCTTAACAAAAACAAAAGTTTTCGGAAAAATTGTGATATGCGAACGAGGCGGAAACTCAAGGGCTGAAAAGGGTCTAGTAGTAAAAAACGCTGGTGGTGTAGGAATGATTCTAGCTAACAATGAAGAGTATGGTGAAGAACTAATAGCAGATTCTCATCTTCTACCAGCAGCATCATTGGGTCTAAAATCAAGCAACATTCTAAAAAACTACATTTTCACCACAAAAAATCCAAAAGCCAAACTAGTTTTCGGTGGCACACATTTACAAGTTCAACCTTCACCAGTAGTAGCAGCATTCAGTTCAAGAGGCCCAAACTCTCTAACACCGAAGATTCACAAACCCGATTTAATAGCTCCGGGCGTAAACATCTTAGCCGGTTGGACCGGTTCAGTTGGTCCAACCGGTTTAACCACAGACAAAAGGCACGTGAGTTTCAATATTATATCAGGAACTTCAATGTCATGCCCACACGTGAGCGGTTTAGCTGCTATAGTTAAAGGAGCTTACCCTGAATGGAGCCCCGCTTCTATACGGTCAGCGTTAATGACCACAGCATACACCTCTTACAAAAACGGTGAAACAATCCAAGACGTCGCAACCGGGAAACCCGCTACACCGTTCGATTTCGGATCCGGACACGTGGATCCTGTCTCCGCCCTTGATCCTGGACTTGTGTACGACATCAATGTTGACGATTATCTTGGATTTTTCTGTGCGTTGAACTACACGGCAGCGCAGATCAAAATCGCGGCGAGGAGAGATTTCGTTTGTGATCGGAAGAAGAATTATAGGGTTGAGGATTTTAATTATCCTTCTTTTGCGGTTGCTTTGGAGACAGCTTCGGGAATTGGCGGTGGTTCGGATAAGCCGGTGACGGTGGAGTATAGTAGGGTTGTTACGAATGTGGGAGGTCCGGGGTTTTATAAAGCTACGGTGGTGCTTTCGGCGGAGGATTCTTCGTCGGTGAAGGTTGTGGTGGTGCCGGAGAGTATTAAGTTTAGTGAAGTGAATGAGAAAAAAGGTTATACGGTGCGTTTTACGTGCGGTTCGATGCCGTCTGGAACCAAGAGTTTTGGGTATTTGGTTTGGAGTGATGGGAAACATAGGGTTTCGAGTCCAATTGTGTTTAGTTGGACTTGA 2295 0.4392 MQIFKSLQIILLLIFCSRHTTAQTKNTYIIHMDKSTMPETFTDHVNWFDTSLKSVSETAEILYTYKHIAHGFSTRLTHQEAETLSNQPGILSVIPELRYELHTTRTPQFLGLPQTNTLLPQSKQQSQVIIGILDTGIWPETKSLDDTGLGPIPSSWKGTCETGNNMNSSNCNRKLIGARFFAKGYEAALGPIDETTESRSPRDDDGHGTHTLTTAAGSVVAEASLFGLASGTARGMATQARVAAYKVCWTGGCFTSDIAAGMDKAIEDGVNILSMSIGGSLTEYYRDIIAIGTFSAMSHGILVSSSAGNGGPSAESLSNVAPWITTVGAGTIDRNFPSYITLANGKNYTGASLYNGKPLPDSFLPLVYAGNVSNSAVGYLCIPDSLTKTKVFGKIVICERGGNSRAEKGLVVKNAGGVGMILANNEEYGEELIADSHLLPAASLGLKSSNILKNYIFTTKNPKAKLVFGGTHLQVQPSPVVAAFSSRGPNSLTPKIHKPDLIAPGVNILAGWTGSVGPTGLTTDKRHVSFNIISGTSMSCPHVSGLAAIVKGAYPEWSPASIRSALMTTAYTSYKNGETIQDVATGKPATPFDFGSGHVDPVSALDPGLVYDINVDDYLGFFCALNYTAAQIKIAARRDFVCDRKKNYRVEDFNYPSFAVALETASGIGGGSDKPVTVEYSRVVTNVGGPGFYKATVVLSAEDSSSVKVVVVPESIKFSEVNEKKGYTVRFTCGSMPSGTKSFGYLVWSDGKHRVSSPIVFSWT 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04869 764 Pfam Fibronectin type-III domain 652 760 IPR041469 -
Vifa3g04869 764 Pfam Subtilase family 126 595 IPR000209 GO:0006508|GO:0008236
Vifa3g04869 764 FunFam Subtilisin-like protease SBT1.5 127 349 - -
Vifa3g04869 764 FunFam Subtilisin-like protease SBT1.9 16 102 - -
Vifa3g04869 764 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 760 IPR045051 -
Vifa3g04869 764 CDD PA_subtilisin_like 339 466 - -
Vifa3g04869 764 ProSitePatterns Serine proteases, subtilase family, serine active site. 535 545 IPR023828 -
Vifa3g04869 764 Pfam Peptidase inhibitor I9 27 102 IPR010259 -
Vifa3g04869 764 FunFam subtilisin-like protease SBT1.5 333 473 - -
Vifa3g04869 764 Gene3D - 333 474 - -
Vifa3g04869 764 SUPERFAMILY Subtilisin-like 101 609 IPR036852 GO:0004252|GO:0006508
Vifa3g04869 764 Gene3D Peptidase S8/S53 domain 128 618 IPR036852 GO:0004252|GO:0006508
Vifa3g04869 764 MobiDBLite consensus disorder prediction 192 211 - -
Vifa3g04869 764 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 102 IPR037045 -
Vifa3g04869 764 Gene3D - 622 763 - -
Vifa3g04869 764 CDD Peptidases_S8_3 99 571 IPR034197 -
Vifa3g04869 764 PRINTS Subtilisin serine protease family (S8) signature 534 550 IPR015500 -
Vifa3g04869 764 PRINTS Subtilisin serine protease family (S8) signature 125 144 IPR015500 -
Vifa3g04869 764 PRINTS Subtilisin serine protease family (S8) signature 203 216 IPR015500 -
Vifa3g04869 764 Pfam PA domain 365 447 IPR003137 -
Vifa3g04869 764 SUPERFAMILY PA domain 358 427 IPR046450 -
Vifa3g04869 764 ProSiteProfiles Serine proteases, subtilase domain profile. 98 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04869 Vifa-Chr3 1410973834 1410976128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04869 9 764 Subtilisin-like Serine Gene Family AT5G67360 61.609 0.0 981
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04869 - - gmx:100793808 1217.6