Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04739 ATGTCAAGACCAAGATCACACTCACTCTCTTATCACCACCACTTCTTGTTAATGATGCCAGTTTTTCTTCTCATTTTCCACTCTCTTCCTCATTCCTCTCTCGCCATCCGTCCTACTCACTCCGATCGCTTAGATTTCGAACTCACCAACTCCACCGACTCCAATGTCTCCCTCTCCACTCCTCGACAAGGCTCCTTTGCTGATATCATTGATCGAGCTCTTCAGCACGAGTTCACCGACAACGATGATCAAAACGAAGTGCCGGATTCGGGAGGTTTCAATAACAGTGTAGCAGAACAACAGGCTGTTCTGGAGACTGTGGCCAGAGTCACGCCGAACAAGAATGACACTAAAGATGAAAAGTCATTTCAACTCCATCATGTATTCAATAGAGGCGAGGACACCCCAATATTAATAGATCGAAAGGACAATGTATTTATCATTTCTAACTTTAAATCCAAGTATCCGGTGCTACAGCTAGATTTACGATTGATTTCAGACTTGGTAGTTGCTATTGTTTCAGCAACTTGTGGCGGTGTTGCATTTGCTTTTGCTGGACAACCGGTCATTACTGGATATCTTCTAGCTGGCTCCATTGTTGGACCTGGAGGCTTTAACTTCATCAATGAAATGGTGCAGGTGGAAACAGTGGCTCAATTTGGCGTAGTATTTATTCTCTTTGCAATGGGCCTGGAGTTTTCCATGACAAAGCTTCGAGTTGTTCGGTCTGTTGCAGTTCTTGGAGGCTTACTTCAGATTTTTCTATTTATGTGCATGTGTGGTTTTACTGTATCATTATGTGGTGGTAAAGCTTCAGAAGGGATTTTTGTTGGTGCTTTCCTTTCGATGTCTTCAACAGCAGTGGTCTTGAAGTTTTTGATGGAAAAGAACACTACTAATGCCCTTCATGGACAAGTCACGATTGGGACCCTTATTTTACAGGATTGCGCTGTTGGATTGCTCTTTGCATTGCTTCCAGTTTTGGGTGGAACCTCAGGTGTTTTTCAAGGAGTTATATCAATGACAAAGCTGTTGGCGACGTTGATTGCATTTCTCTCTATTCTTTCAATATTGTCTCTCACTTGCCTTCCGTGGTTTCTTAAACTGATGATAAGCCTATCATCACAGACAAATGAACTCTATCAGCTGGCGTCTGTTGCATTCTGCTTGCTTGTAGCCTGGTGTAGTGATAAGCTGGGATTAAGTCTAGAGCTAGGTTCCTTTGCTGCTGGAGTGATGATTGCAACCACTGATCTGTCTCAACATACACTAGAGCAAATTGAACCTATTTGCAATCTTTTTGCTGCTCTTTTCCTTGCAAGCATTGGAATGCTGATTCATGTACATTTTCTCTGGAACCATGTTGATATTTTGGTAGCATCAGTAATTTTGGTGATTGTAATTAAAACAATCATAATTGCTTCAGTTGTAAAAGGATTTGGTTACAATAACAAGACTTCAGTACTTGTGGGAATGTCCATGGCACAGATAGGAGAATTTGCTTTTGTTCTTCTCAGTCGTGCTTCAAATCTTCATCTAGTTGAGGGTAAACTGTATCTGCTGCTTCTTGGGACCACAGCTCTTAGTCTGGTGACGACTCCTTTACTTTTCAAGCTGATTCCTGCTGTAGTACATCTTGGTGTGCTATTGAGGTGGTTTTCTCCCGACGGTACAGTGGAGATTGGATATAAGGTAGATATCCTCGTCCGCTCAGATAGTGGTAAGCAGCGGATAATTTTGATGGATCAAGAAGCTCACGATTGTTAA 1767 0.4222 MSRPRSHSLSYHHHFLLMMPVFLLIFHSLPHSSLAIRPTHSDRLDFELTNSTDSNVSLSTPRQGSFADIIDRALQHEFTDNDDQNEVPDSGGFNNSVAEQQAVLETVARVTPNKNDTKDEKSFQLHHVFNRGEDTPILIDRKDNVFIISNFKSKYPVLQLDLRLISDLVVAIVSATCGGVAFAFAGQPVITGYLLAGSIVGPGGFNFINEMVQVETVAQFGVVFILFAMGLEFSMTKLRVVRSVAVLGGLLQIFLFMCMCGFTVSLCGGKASEGIFVGAFLSMSSTAVVLKFLMEKNTTNALHGQVTIGTLILQDCAVGLLFALLPVLGGTSGVFQGVISMTKLLATLIAFLSILSILSLTCLPWFLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMIATTDLSQHTLEQIEPICNLFAALFLASIGMLIHVHFLWNHVDILVASVILVIVIKTIIIASVVKGFGYNNKTSVLVGMSMAQIGEFAFVLLSRASNLHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVVHLGVLLRWFSPDGTVEIGYKVDILVRSDSGKQRIILMDQEAHDC 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04739 588 Pfam Sodium/hydrogen exchanger family 169 538 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vifa3g04739 588 Gene3D - 162 545 IPR038770 -
Vifa3g04739 588 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 45 560 IPR045158 GO:0015386|GO:0071805|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04739 Vifa-Chr3 1364591613 1364604338 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04739 61 586 Antiporters AT5G11800 79.887 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04739 K26735 - gmx:100811030 938.717