Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04738 ATGTCAAGACCAAGATCACACTCACTCTCTTATCACCACCACTTCTTGTTAATGATGCCAGTTTTTCTTCTCATTTTCCACTCTCTTCCTCATTCCTCTCTCGCCATCCGTCCTACTCACTCCGATCGCTTAGATTTCGAACTCACCAACTCCACCGACTCCAATGTCTCCCTCTCCACTCCTCGACAAGGCTCCTTTGCTGATATCATTGATCGAGCTCTTCAGCACGAGTTCACCGACAACGATGATCAAAACGAAGCTTTATTAACAGTGCCGGATTCGGGAGGTTTCAATAACAGTGTAGCAGAACAACAGGCTGTTCTGGAGACTGTGGCCAGAGTCACGCCGAACAAGAATGACACTAAAGATGAAAAGTCATTTCAACTCCATCATGTATTCAATAGAGGCGAGGACACCCCAATATTAATAGATCGAAAGGACAATGTATTTATCATTTCTAACTTTAAATCCAAGTATCCGGTGCTACAGCTAGATTTACGATTGATTTCAGACTTGGTAGTTGCTATTGTTTCAGCAACTTGTGGCGGTGTTGCATTTGCTTTTGCTGGACAACCGGTCATTACTGGATATCTTCTAGCTGGCTCCATTGTTGGACCTGGAGGCTTTAACTTCATCAATGAAATGGTGCAGGTGGAAACAGTGGCTCAATTTGGCGTAGTATTTATTCTCTTTGCAATGGGCCTGGAGTTTTCCATGACAAAGCTTCGAGTTGTTCGGTCTGTTGCAGTTCTTGGAGGCTTACTTCAGATTTTTCTATTTATGTGCATGTGTGGTTTTACTGTATCATTATGTGGTGGTAAAGCTTCAGAAGGGATTTTTGTTGGTGCTTTCCTTTCGATGTCTTCAACAGCAGTGGTCTTGAAGTTTTTGATGGAAAAGAACACTACTAATGCCCTTCATGGACAAGTCACGATTGGGACCCTTATTTTACAGGATTGCGCTGTTGGATTGCTCTTTGCATTGCTTCCAGTTTTGGGTGGAACCTCAGGTGTTTTTCAAGGAGTTATATCAATGACAAAGCTGTTGGCGACGTTGATTGCATTTCTCTCTATTCTTTCAATATTGTCTCTCACTTGCCTTCCGTGGTTTCTTAAACTGATGATAAGCCTATCATCACAGACAAATGAACTCTATCAGCTGGCGTCTGTTGCATTCTGCTTGCTTGTAGCCTGGTGTAGTGATAAGCTGGGATTAAGTCTAGAGCTAGGTTCCTTTGCTGCTGGAGTGATGATTGCAACCACTGATCTGTCTCAACATACACTAGAGCAAATTGAACCTATTTGCAATCTTTTTGCTGCTCTTTTCCTTGCAAGCATTGGAATGCTGATTCATGTACATTTTCTCTGGAACCATGTTGATATTTTGGTAGCATCAGTAATTTTGGTGATTGTAATTAAAACAATCATAATTGCTTCAGTTGTAAAAGGATTTGGTTACAATAACAAGACTTCAGTACTTGTGGGAATGTCCATGGCACAGATAGGAGAATTTGCTTTTGTTCTTCTCAGTCGTGCTTCAAATCTTCATCTAGTTGAGGGTAAACTGTATCTGCTGCTTCTTGGGACCACAGCTCTTAGTCTGGTGACGACTCCTTTACTTTTCAAGCTGATTCCTGCTGTAGTACATCTTGGTGTGCTATTGAGGTGGTTTTCTCCCGACGGTACAGTGGAGATTGGATATAAGGTAGATATCCTCGTCCGCTCAGATAGTGGTAAGCAGCGGATAATTTTGATGGATCAAGAAGCTCACGATTGTTAA 1779 0.421 MSRPRSHSLSYHHHFLLMMPVFLLIFHSLPHSSLAIRPTHSDRLDFELTNSTDSNVSLSTPRQGSFADIIDRALQHEFTDNDDQNEALLTVPDSGGFNNSVAEQQAVLETVARVTPNKNDTKDEKSFQLHHVFNRGEDTPILIDRKDNVFIISNFKSKYPVLQLDLRLISDLVVAIVSATCGGVAFAFAGQPVITGYLLAGSIVGPGGFNFINEMVQVETVAQFGVVFILFAMGLEFSMTKLRVVRSVAVLGGLLQIFLFMCMCGFTVSLCGGKASEGIFVGAFLSMSSTAVVLKFLMEKNTTNALHGQVTIGTLILQDCAVGLLFALLPVLGGTSGVFQGVISMTKLLATLIAFLSILSILSLTCLPWFLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMIATTDLSQHTLEQIEPICNLFAALFLASIGMLIHVHFLWNHVDILVASVILVIVIKTIIIASVVKGFGYNNKTSVLVGMSMAQIGEFAFVLLSRASNLHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVVHLGVLLRWFSPDGTVEIGYKVDILVRSDSGKQRIILMDQEAHDC 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04738 592 Gene3D - 166 549 IPR038770 -
Vifa3g04738 592 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 45 564 IPR045158 GO:0015386|GO:0071805|GO:1902600
Vifa3g04738 592 Pfam Sodium/hydrogen exchanger family 173 542 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04738 Vifa-Chr3 1364591613 1364604338 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04738 61 590 Antiporters AT5G11800 79.291 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04738 K26735 - gmx:100811030 934.48