Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04727 ATGTTTCTAATCGAGGTTCTACAATCCGTACGCGTCTTCACCACGAACTCGAGCTGCAAAACCAGTGAGTCAGAGCTATGTCGCGACGAGTCAACCGCGTTAGTTCTAAAATTCGTGGCGATGGCATCAATTCTAGTAGCGGGATTTTCCGGAATCGCGATACCGCTACTAGGAAAGCGGCGGGGATTGTTGCGAGGCGACGGAGATATTTTAGCGGCGGCGAAGGCGTTTGCGGCGGGAGTGATATTAGCGACGGGGTTTGTTCACATGCTTAAGGACGCGTGGGAAGCACTGAACCATAGTTGTTTGAAAACTTACTCGCACGTGTGGTCCAAGTTTCCATTTGCCGGGTTTTTCGCGATGGTGGCTGCGTTGTTTACTCTTTTAGTTGACTTTATTGGAACACAATACTATGAAAGAAAACAAAGGGTTACACGTGGCGGTGTGGCCGTGCAACACGGAGAGGTTGTTGATGAGTTGGAGGAGGAATTGTTGGAAGAGGAAATCGTGGAAGTTAAGGAAGAGAGTAGTAGTGGCGGTGGGATGCATGCACATGCGTCAAACCATGGACATGGACATGGACATGGTGATTCTCTCGGAGAGAATGATGACGTGGAAGGTAGTATCCGCCATGTGGTTATTTCGCAGGTATTGGAACTTGGAATAGTTTCACATTCCATGATAATTGGGTTATCACTAGGAGTTTCACAAAGTCCATGCACAATGAGACCCTTAATTGCAGCACTATGCTTTCACCAATTCTTTGAAGGATTTGCACTGGGTGGATGCATATCAGAAGCCAAATTTAAGACATCATCGGCGACAATAATGGCATGTTTTTTTGCACTAACAACACCACTTGGTGTTGCAATAGGGACATTAGTTGCCTCGAATTTCAATCCTTATAGTCCAGGATCTCTTATAACGGAAGGTATATTGGATTCTTTTTCAGCTGGAATTTTAGTGTACATGGCTTTGGTGGATTTAATAGCTGCTGATTTTCTTAGTAAGAGAATGCGTTCTAGTTTTAGGCGTCAGATTTTGTGTTTTTGTTTGCTTTTCCTTGGGGCTGGATTTATGTCATCACTTGCACTTTGGGCATGA 1104 0.4502 MFLIEVLQSVRVFTTNSSCKTSESELCRDESTALVLKFVAMASILVAGFSGIAIPLLGKRRGLLRGDGDILAAAKAFAAGVILATGFVHMLKDAWEALNHSCLKTYSHVWSKFPFAGFFAMVAALFTLLVDFIGTQYYERKQRVTRGGVAVQHGEVVDELEEELLEEEIVEVKEESSSGGGMHAHASNHGHGHGHGDSLGENDDVEGSIRHVVISQVLELGIVSHSMIIGLSLGVSQSPCTMRPLIAALCFHQFFEGFALGGCISEAKFKTSSATIMACFFALTTPLGVAIGTLVASNFNPYSPGSLITEGILDSFSAGILVYMALVDLIAADFLSKRMRSSFRRQILCFCLLFLGAGFMSSLALWA 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04727 367 Pfam ZIP Zinc transporter 36 364 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vifa3g04727 367 NCBIfam ZIP zinc/iron transport family 19 367 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vifa3g04727 367 PANTHER ZINC/IRON TRANSPORTER 33 360 - -
Vifa3g04727 367 MobiDBLite consensus disorder prediction 176 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04727 Vifa-Chr3 1360398962 1360400147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04727 14 367 Inorganic Solute Cotransporters AT1G10970 60.904 4.06e-149 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04727 K14709 - gmx:100809426 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04727 3 1360398962 1360400147 Vifa2g03764 2 1103778885 1103780638 PCT