Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04608 ATGGCATCAAGGTATTTTTACAAGGATGTGCTTCCATTCACTGTAATGGTTGCAATAGAGTTCACAAACGTTGGTGTTTCTGTTCTATTCAAAGCAGCAACTCAAAATGGATTGAGTTTCTATGTCTTCATTGCTTATTCATATCTTGTCTCCACTCTTGTTCTTCTTTTGCTTCAACCCTTCTTCCTCAAATGGTCAAGAGGGCTTCCTCCTTTGAACAAGTCTCTAATCTTCAGAATCTTTCTCCTTGGAGTTTTGGGAGTTATAGCTCAGCTTTTTGGATATAAAGGACTTGAATACACTACACCTACTCTTTCTTCTGCTCTTGGCAACCTTATACCTGCTTTCACATTCATCCTAGCTATCTTTTTCAGGATGGAGTATATAAATTTAAGAAGCAAAAGCAGTCAAGCCAAAATATTGGGTTCTACCGTATCGATATTAGGCGCACTCGTAGTTGTACTTTACAAAGGTCCAATGATTATATCTTCACCATCAAATAAACCACTACATACTATTGATTCTCCAATAAATCTAACAACACAATCAAATTGGATTCTTGGTGGATCTCTACTTGTTATAGAGTTTCTCATTATTCCAATCTGGTATATTATTCAGACAAACGTCATAAAAGAATATCCATCAGAGGTTATTGTGGTCTTTTTATATAACCTATGTGGAGTAATAGTGTCTGTGCCACTATGCTTACTACTAGAACCAAACTTGAGTGCATGGAAAATAAATCCCAATATCGAGTTGATTTCTATTTTATTCTCGGGAATTTTTTGCACCGGATTAAGTAGTCTCGTTCATACTTGGGGACTTCATGTTAAAGGCCCTTTATATATATCAATGTTTAAGCCATTGTCAATAGCTATTGCTGCATGTATGAGTGCTATATTTCTTGGAGATGCACTCTATTTTGGAACTGTTGTTGGAGCAGTAGTAATATCGATTGGATTTTATGCTGTTTTATGGGGAAAATCTAAAGAAGAATTGATTGGTGATTTTGACACAAATAGAGTTCCACTTTCATACAATGCTAAGACTCCTTTGTTGAAAGGCTAA 1068 0.3577 MASRYFYKDVLPFTVMVAIEFTNVGVSVLFKAATQNGLSFYVFIAYSYLVSTLVLLLLQPFFLKWSRGLPPLNKSLIFRIFLLGVLGVIAQLFGYKGLEYTTPTLSSALGNLIPAFTFILAIFFRMEYINLRSKSSQAKILGSTVSILGALVVVLYKGPMIISSPSNKPLHTIDSPINLTTQSNWILGGSLLVIEFLIIPIWYIIQTNVIKEYPSEVIVVFLYNLCGVIVSVPLCLLLEPNLSAWKINPNIELISILFSGIFCTGLSSLVHTWGLHVKGPLYISMFKPLSIAIAACMSAIFLGDALYFGTVVGAVVISIGFYAVLWGKSKEELIGDFDTNRVPLSYNAKTPLLKG 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04608 355 PANTHER WAT1-RELATED PROTEIN 11 338 IPR030184 GO:0016020|GO:0022857
Vifa3g04608 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 225 330 - -
Vifa3g04608 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 157 - -
Vifa3g04608 355 Pfam EamA-like transporter family 26 154 IPR000620 GO:0016020
Vifa3g04608 355 Pfam EamA-like transporter family 192 325 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04608 Vifa-Chr3 1319509106 1319510731 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04608 1 334 Nodulin-like Gene Family AT5G40240 53.869 1.92e-127 368