Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04607 ATGGCATCAAGAAATTGTTATAGCAAAGTTGTGATTCCATTTGCTGCAATGGTTGCAATGGAGTTCACAAACGTTGGTGTCAATGTTCTATTCAAAGCAGCTACTCAAAATGGTTTGAGTTTCTATGTCTTCACTGCTTATTCATATGTTGTATCCTCTCTTGTTCTCCTTTTGCCTTTACCCTTCTTCAAAAGAGTTGTAGCTTTGCTATTTGGATATAAAGGGCTTGAATACACTACACCTATACTCTTGCATCTGCTCTTGGGAACATTATACCTGCTTTTACTTTCATCCTAG 297 0.3737 MASRNCYSKVVIPFAAMVAMEFTNVGVNVLFKAATQNGLSFYVFTAYSYVVSSLVLLLPLPFFKRVVALLFGYKGLEYTTPILLHLLLGTLYLLLLSS 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04607 98 PANTHER WAT1-RELATED PROTEIN 13 83 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04607 Vifa-Chr3 1319502031 1319502618 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04607 7 83 Nodulin-like Gene Family AT5G40230 44.444 8.89e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04607 - - pvu:PHAVU_008G152800g 79.3369