Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04605 ATGGCTGTTTCATCTTCTTCTTGTTCTCTTTTGCTCCTTTTTCTTGTCCTTGCTTTTGCTGCTGCAGCACCCAAGGATTACTTGCTTGGTGGTAAACCTGATGCTTGGAAGGTTCCATCCTCTGAATCTGACTCTCTCAACAAATGGGCTGAAACTGTTCGTTTCCGCATTGCAGATCATCTCATTTTTAACTATGAAGCTGGAAAAGACTCTGTTTTGCAAGTGAGCAAAGAGGATTATGTCAGCTGCAACACCTCAAACCCAATCAAGAAGTACAATGATGGGAAAACAAAGGTGAGATTTGATCATTCTGGTCCATACTACTACATAAGTGGAGAAAAGGGTCACTGTGAAAAGGGTGAGAAGGTTATTGTGTTGGTTGTAAGCCAAAGAAGTTCAAGTGCTGCTCCTGTTTCACCTGCATCTGCTCCTTCACGAGGTAGTGGTGTTGAAGGGCCAGCTGTTGCTCCAAGTCCAACTAGTGGTGCTGATGTTTTGCAAGGTGGGGGTGTTTTGATGGCTGTGGGAGTGGTGATTGCCATGTTGGTTTTCTGA 555 0.445 MAVSSSSCSLLLLFLVLAFAAAAPKDYLLGGKPDAWKVPSSESDSLNKWAETVRFRIADHLIFNYEAGKDSVLQVSKEDYVSCNTSNPIKKYNDGKTKVRFDHSGPYYYISGEKGHCEKGEKVIVLVVSQRSSSAAPVSPASAPSRGSGVEGPAVAPSPTSGADVLQGGGVLMAVGVVIAMLVF 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04605 184 Gene3D - 25 139 IPR008972 -
Vifa3g04605 184 Pfam Plastocyanin-like domain 36 120 IPR003245 GO:0009055
Vifa3g04605 184 CDD OsENODL1_like 25 127 IPR041846 -
Vifa3g04605 184 PANTHER BLUE COPPER PROTEIN 26 132 IPR039391 GO:0009055
Vifa3g04605 184 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
Vifa3g04605 184 FunFam Early nodulin-like protein 1 24 132 - -
Vifa3g04605 184 MobiDBLite consensus disorder prediction 135 161 - -
Vifa3g04605 184 SUPERFAMILY Cupredoxins 25 128 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04605 Vifa-Chr3 1318799669 1318800319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04605 15 181 Phytocyanin Superfamily AT2G25060 47.305 4.01e-53 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04605 - - gmx:100527857 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04605 3 1318799669 1318800319 Vifa3g04605 3 1318799669 1318800319 ECH
Vifa3g04605 3 1318799669 1318800319 Vifa2g03913 2 1141508044 1141508687 PCT