Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04587 ATGGCCAAGAAGAACAAGAGCTGGTTTAATCTGGTGAAGAGCCTTTTCATATGGGACACACATTCCACACAAGAGAAGAAAGAGAAAAGAAGGAAATGGATATTTGGAAAGCTAAAAACCAAGAAGTTACCTTCAATTACAGCTCCAGCAACAACATCAAATGAAGCTGAGGAGGAGGGAAAAACCAAGCATTCTCAAGTTGTTATGCTTAATGAAAGAGAGATTCAAGAATTTGCAGCCATCAAAATTCAAACTGCTTTTAGGGGCTACCTTGCAAAGAAGGCTTTGAGGGCATTGAAAGGAATAGTAAAACTTCAAGCGATTATTCGTGGGCGAGCAGTGAGACGCCAAGCTATGAGTACTCTCAAGAGCTTGCAGTCCATTGTAAGTATTCAATCAAAGATATGTGCAAGGAGACTCCAAATGGTTGAAGGAAGATGGGATTCTGTTGAAGATGAAGAGACTCTTTATTCTAAAGACAAGATCATTAGGATGGACTCAAACAGCGAAAGAAAGTGGGATGACAGCACTTTATTGAAGGAAGAGGTAGATGCCTGTTGCATGATCAAGAAAGAAGGCATTATTAAGAGAGAAAGAATAAAAGAATACACATTTAATCATAGAAGGTCAGCAGAGTCAGAAAGAAGTAAAGTGAACGGAAGATGGAGGTACTGGCTAGAGCAATGGGTAGATACACAGCTTTCTAAAAGCAAAGAACTTGAAGGAGGGTATGAATGGATTTGGATGTGGCATAAAAGTTGCATACTAAAAGATCACGATGTTTTTGATACTTGGCCTTGA 801 0.3933 MAKKNKSWFNLVKSLFIWDTHSTQEKKEKRRKWIFGKLKTKKLPSITAPATTSNEAEEEGKTKHSQVVMLNEREIQEFAAIKIQTAFRGYLAKKALRALKGIVKLQAIIRGRAVRRQAMSTLKSLQSIVSIQSKICARRLQMVEGRWDSVEDEETLYSKDKIIRMDSNSERKWDDSTLLKEEVDACCMIKKEGIIKRERIKEYTFNHRRSAESERSKVNGRWRYWLEQWVDTQLSKSKELEGGYEWIWMWHKSCILKDHDVFDTWP 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04587 266 ProSiteProfiles IQ motif profile. 100 127 IPR000048 GO:0005515
Vifa3g04587 266 PANTHER IQ-DOMAIN 5-RELATED 4 232 - -
Vifa3g04587 266 Gene3D - 75 127 - -
Vifa3g04587 266 ProSiteProfiles IQ motif profile. 76 104 IPR000048 GO:0005515
Vifa3g04587 266 Pfam IQ calmodulin-binding motif 79 97 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04587 Vifa-Chr3 1315288236 1315289735 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04587 1 241 IQD Protein Family AT5G13460 50.360 3.27e-76 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04587 - - lang:109325242 352.058