Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04575 ATGGAACAGTCTGCTATATTTTCAAATCATAATCATTTCACTCCAAAACTGTTGGTAAGTATTAATAACGAGATCACTTTTAATAAAGTATGCAGAGATATCATTAACCATTTAGTGAAAATGTATCGGGAATCTCAGTTGGACAACCACATACCTGCTTACGATGGAAGGAAAAGCTTATTTACTGCTGGGGCAATAACTTTTAACTCTAAGGTTTGTGTGGTTAACTTGACTAATGAAAATAGAGGATCCTCTTCTGATTCTTTTGATTGGAAAAAGTGTGAACGAGAATTTAAGGTTACTATAAAGTTTGCTTCCAAGACGGATCTCTACCACCTTACTCGGTTTCTCCGTCGTATGCAACCGGATTGTCCTTATGAAACCCTTCAAGCTCTTGACATTACTTTAAGGGAAACTTCATCTGAGAAGTAG 432 0.3634 MEQSAIFSNHNHFTPKLLVSINNEITFNKVCRDIINHLVKMYRESQLDNHIPAYDGRKSLFTAGAITFNSKVCVVNLTNENRGSSSDSFDWKKCEREFKVTIKFASKTDLYHLTRFLRRMQPDCPYETLQALDITLRETSSEK 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04575 143 Pfam N-terminal domain of argonaute 26 136 IPR032474 -
Vifa3g04575 143 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 19 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04575 Vifa-Chr3 1311505591 1311506042 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04575 11 143 Eukaryotic Initiation Factors Gene Family AT1G48410 43.972 3.93e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04575 K11593 - psat:127108038 183.341