Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04566 ATGAAAGGGAAGCATTTAGGCCAGGATATTTTGGATGCTCAACTTGGTTGCGAAGTCCTTGAAACAATTGAGCTAGATGATATAAATGATAACTTAGTTGGTATCGCTGGTCAAAGTGGCTTATCTATCGAGCAACGTAAAAGTCTAATCATAGCAGCAGAGTCGGAAGGGAAAATAAGATTGACCGGACTCGGTGCCAGAGATTGTCTACGTCTTGAAGCTGGATTGTGCTTGTACGAAAATGACTTGGAACAACACATTACACCTATTGAAGCAGGACTGACATGGGCCATAGGTAAGAGAAGGAGAGCAAAAGGTGGTTTTCTAGGTGCTGATGTTATCCTGAAACAGCTCACAGATGGTCCTTACATAAGGCGTGGTTTCATTTCTTATGGTCCACCTCCAAGAAGCCACGGCGAGATTCAAGATGAAGGAGGCAACAACATTGAATCAGAATATGATGAGTCAGAATCAGAAGATGGCGCTGAAGATTTTGAAGATAAGTCAGAATCTGAGGTTTCTGAAGACGAGTTAGAGTCAGAAGATGACTCTGAAGCTGAAGACAAGTCAGAATCCGAAGGTGATTCTGAAGGAGATTCTGCTTCTGAAGAAGAGTCAGAAGATGATGACTCTGGAAACTCTGAAGAAATTACCAGTGGTGAATTCAATCCTTGTCTCAAGAAGAACGATATGTCAAATCTGGATTGCACAAAGCAGTTGGACAACCACATACCTGTTTACGATGGAAGAAAAAGCTTATTTACTGCTGGGGCGTTACCTTTTAACTCCAAAATTTTTGTGGTTAACTTGACTGATGAAAATAGAGGATCCTCTTCTGATTCTTTTGATTGGAAAAAGCGTGAGCGGGAGTTTAAGGTTACTATACAGTTTTCTTCCAAGACGGATCTCTACCATCTTACTCAGTTTCTCCGTCGTATGCAACCAGATTGTCCTTATGAAACCATTCAAGCTCTTGACATTGCTTTAAGGTTAACTCCATCTGAGAAGTAG 1011 0.4135 MKGKHLGQDILDAQLGCEVLETIELDDINDNLVGIAGQSGLSIEQRKSLIIAAESEGKIRLTGLGARDCLRLEAGLCLYENDLEQHITPIEAGLTWAIGKRRRAKGGFLGADVILKQLTDGPYIRRGFISYGPPPRSHGEIQDEGGNNIESEYDESESEDGAEDFEDKSESEVSEDELESEDDSEAEDKSESEGDSEGDSASEEESEDDDSGNSEEITSGEFNPCLKKNDMSNLDCTKQLDNHIPVYDGRKSLFTAGALPFNSKIFVVNLTDENRGSSSDSFDWKKREREFKVTIQFSSKTDLYHLTQFLRRMQPDCPYETIQALDIALRLTPSEK 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04566 336 Pfam Aminomethyltransferase folate-binding domain 49 97 IPR006222 -
Vifa3g04566 336 FunFam Aminomethyltransferase 75 119 - -
Vifa3g04566 336 PANTHER AMINOMETHYLTRANSFERASE 52 149 IPR028896 -
Vifa3g04566 336 SUPERFAMILY Folate-binding domain 49 121 - -
Vifa3g04566 336 Pfam N-terminal domain of argonaute 239 329 IPR032474 -
Vifa3g04566 336 MobiDBLite consensus disorder prediction 147 215 - -
Vifa3g04566 336 Gene3D Aminomethyltransferase fragment 80 119 - -
Vifa3g04566 336 Gene3D Probable tRNA modification gtpase trme; domain 1 42 79 IPR027266 GO:0005515
Vifa3g04566 336 MobiDBLite consensus disorder prediction 129 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04566 Vifa-Chr3 1308754144 1308761931 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04566 214 336 Eukaryotic Initiation Factors Gene Family AT1G48410 44.715 1.15e-24 103