Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04550 ATGTCTTTAATAGCAGAAGCACCAGAGTTTCTACAAGTTTTCTCTGATGGAACAGTGAAACGTTTCAACCCAGAAACATCACCACCTTCTTTAGATTCATCCAACAAATACATATCCAAAGACATAATCATCAACCCTTCAAAACCAATCACAGGAAGACTCTTCCTTCCCAACAATCCAAACAAAAAACTCCTCCCTCTCTTAGTTTATTTCCATGGAGGTGGCTTCTGCATTGGCTCAACAACATGGCTAGGCTACCACTCTTTCCTCGGCGAACTCTCTGTCGCGTCACATTCCATTATTCTCTCTGTCGATTACCGTTTAGCACCGGAATATCGTCTTCCGATAGCTCATGAAGATTGTTACTCATCACTTGAATGGCTTGGTGAGAATGTGAAAGTTGAACCTTTTCTTGAACATGCTGATTTGAATAATGTGTTTCTCTCTGGTGATAGTGCTGGTGGGAACATTTCACATCATGTTGCGGTGAAAGCTATTCAGAAGAATGAGCTTTGTCCTGTGAAGATTAAAGGGGTGATGCCTATACATCCTTATTTTGGGAGTGAGAAAAGGACTGAGAACGAGAATGGTGAAGAAGGTTCTGAGGATGTGAGAATGAATGATATGTTTTGGAGATTGAGTATACCTGAAGATTCGAACCGTGATTATTTTGGTTGTAACTTTGAGAAACATGAAGTTTCTGAGAGTGTTTGGTTGAAGTTTCCTGCTGTTGAGGTTTATGTTGCTGGGGAGGATTTTTTGAAGGAAAGAGGTGTTATGTATGGTGAGTTTTTGAAGAAGAGAGGTGTGAAAGAGGTTAAGGTTGATGAGGCTAAGGATGAGAAACATGTGTTTCATGTTTTTTATCCAGAATCTGATGCAACTAGGTTACTTCAAAACCAGATGAGTCAGTTCATGAAGAGATGTTGTGAGCATTGA 939 0.4015 MSLIAEAPEFLQVFSDGTVKRFNPETSPPSLDSSNKYISKDIIINPSKPITGRLFLPNNPNKKLLPLLVYFHGGGFCIGSTTWLGYHSFLGELSVASHSIILSVDYRLAPEYRLPIAHEDCYSSLEWLGENVKVEPFLEHADLNNVFLSGDSAGGNISHHVAVKAIQKNELCPVKIKGVMPIHPYFGSEKRTENENGEEGSEDVRMNDMFWRLSIPEDSNRDYFGCNFEKHEVSESVWLKFPAVEVYVAGEDFLKERGVMYGEFLKKRGVKEVKVDEAKDEKHVFHVFYPESDATRLLQNQMSQFMKRCCEH 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04550 312 Pfam alpha/beta hydrolase fold 68 286 IPR013094 GO:0016787
Vifa3g04550 312 SUPERFAMILY alpha/beta-Hydrolases 18 309 IPR029058 -
Vifa3g04550 312 Gene3D alpha/beta hydrolase 11 311 IPR029058 -
Vifa3g04550 312 PANTHER ARYLACETAMIDE DEACETYLASE 8 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04550 Vifa-Chr3 1304691318 1304692256 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04550 3 305 Carbohydrate Esterase AT5G16080 34.169 3.85e-56 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04550 - - cam:105852007 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04550 3 1304691318 1304692256 Vifa3g04550 3 1304691318 1304692256 ECH