Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04483 ATGGCACACCAAAACTCTCCCTCTTCAGATCCAGAAGCTCCTGAAATCACTCCATCACTTCCAACTAACCCTTCACACACAAGTTCCACTGCCAAATATGGACTTCAGAAACTGAAAAACAACTTGATTTTCCGTTCTAAATGGGCTGAACTTAATGGTGCCATGGGAGACCTTGGCACTTACATACCCATAATCTTGGCTCTCACTCTTGCTAAGGACCTCAACCTTGGCACCACATTGATTTTCAATGGTGTGTACAACATCTTAACTGGTATCATTTATGGGATTCCTATGCCTGTCCAGCCCATGAAGTCAATCGCCGCCGCGGCCTTATCGGACAAAGAATTCAACCTTCCAGAGATAATGACAGCCGGAATCTTAACCGGCGGCGTGTTGTTCGTTCTTGGGATCACAGGACTGATGCAGCTAGTGTACAAGTTAATTCCTTTATCTGTTGTGAGAGGAATTCAACTTGCACAAGGTTTGTCATTTGCTTTAACTGCTGTTAAATACGTTAGGAAAGTGCAAGATCTTCCAAAGTCTAAAGCTTTGGGTCCAAGACCTTGGTTTGGTTTAGATGGGTTGGTTCTAGCCATTGTTTGTGCTTGTTTTATTGTGATTGTGAATGGAGCTGGCGAAAAGAATCGCGGTTGTTGCGGTGCTCCAGAAGATGGTGGTTTGGATGGACAAAGGAATGGTGAAAGAAAAAGTAAGATGAATAGATTGAGAAAGATTGTGTTTTCACTTCCTTCTGCTTTTTTAGTTTTTGTGTTGGGAATTGTTTTGGTGTTTATAAGAAGACATGAAGTTGTACATGAAATTAAATTTGGACCCTCTTCAATAGAAGTGATGAAATTCACAAAACAAGCATGGAAGAAAGGTTTTATCAAGGGTGCAATTCCACAACTTCCATTGTCCATTTTGAATTCTGTGATAGCTGTTTGTAAATTGTCAACAGATCTTTTTCCGGAAAAGGAATTTTCAGTTACTTCAATTTCAGTGACAGTTGGGCTAATGAATTTGGTTGGTTCATGGTTCGGCGCTATGCCGACTTGTCATGGTGCCGGTGGATTAGCCGGACAGTATAAATTTGGTGGAAGGAGTGGAGGGTGTGTGGCACTTCTTGGTGTTGCAAAATTGGTATTGGGATTGGTTTTAGGAACATCTTTGGCGCATATATTGAACATGTTTCCTGTTGGGATATTAGGTGTGTTGCTTTTGTTTGCTGGCATTGAACTTGCTATGTGTGCTAGAGATATGAATAGCAAAGAAGATTCATTTGTGGCACTTATCTGTACTGCTGTTTCATTGGTTGGATCAAGTGCTGCTCTTGGATTTTTGGTTGGGATGATTGTTTATGTGATGCTTAAGCTAAGGAATTGGAGTAATGATAAACCACTTTCTACCATTTGGAATCAGAAAAGTCCTAACTAA 1434 0.4086 MAHQNSPSSDPEAPEITPSLPTNPSHTSSTAKYGLQKLKNNLIFRSKWAELNGAMGDLGTYIPIILALTLAKDLNLGTTLIFNGVYNILTGIIYGIPMPVQPMKSIAAAALSDKEFNLPEIMTAGILTGGVLFVLGITGLMQLVYKLIPLSVVRGIQLAQGLSFALTAVKYVRKVQDLPKSKALGPRPWFGLDGLVLAIVCACFIVIVNGAGEKNRGCCGAPEDGGLDGQRNGERKSKMNRLRKIVFSLPSAFLVFVLGIVLVFIRRHEVVHEIKFGPSSIEVMKFTKQAWKKGFIKGAIPQLPLSILNSVIAVCKLSTDLFPEKEFSVTSISVTVGLMNLVGSWFGAMPTCHGAGGLAGQYKFGGRSGGCVALLGVAKLVLGLVLGTSLAHILNMFPVGILGVLLLFAGIELAMCARDMNSKEDSFVALICTAVSLVGSSAALGFLVGMIVYVMLKLRNWSNDKPLSTIWNQKSPN 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04483 477 MobiDBLite consensus disorder prediction 1 30 - -
Vifa3g04483 477 Pfam Molybdate transporter of MFS superfamily 295 413 IPR031563 GO:0015098|GO:0015689
Vifa3g04483 477 Pfam Molybdate transporter of MFS superfamily 49 164 IPR031563 GO:0015098|GO:0015689
Vifa3g04483 477 PANTHER - 26 466 IPR031563 GO:0015098|GO:0015689
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04483 Vifa-Chr3 1281944440 1281946112 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04483 23 468 Inorganic Solute Cotransporters AT2G25680 64.955 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04483 - - gmx:100779658 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04483 3 1281944440 1281946112 Vifa3g04483 3 1281944440 1281946112 ECH