Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04466 ATGTTTTACAATTGGTATGGGTGTATCAATGGATTTGCTGGTAGGAAGAGTAAGATGGTAAGGAATGTCAATGGTGAAGTAATTCAACAAACATTTCTCTGCCATAAAGAAGGTGCTAGAGATGACAGATACAACAATTATGCAGTTAGAAAGCGTGAACATAAACCAACTAGCAGGTGTGGTTATTTGGCAAGAATTCAAGTACATCTTGACTTCAACACTAAGCGTTGGTATATTAAATTTTTTGATGATGTTCATAACCATAAATTTGTCGATGACAAGTATGAGCGGATGCTTCCTACACACGGGAAGATGAGCGAATACAACAAATACCAAATGAGGACCATGAGGAAATTGGGCATTCCAACCTCCCGGATATATGGGTTCAGGCAGGAGAATATGCAAAGCTTGTTTATTCTATGA 423 0.3806 MFYNWYGCINGFAGRKSKMVRNVNGEVIQQTFLCHKEGARDDRYNNYAVRKREHKPTSRCGYLARIQVHLDFNTKRWYIKFFDDVHNHKFVDDKYERMLPTHGKMSEYNKYQMRTMRKLGIPTSRIYGFRQENMQSLFIL 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04466 140 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 128 - -
Vifa3g04466 140 Pfam FAR1 DNA-binding domain 2 91 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04466 Vifa-Chr3 1278119389 1278119811 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vifa3g04466 FAR1 5.9e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04466 - - mtr:112420053 213.386