Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04442 ATGGCTTCTGCTTCTGGTTCTGTTGGTTGTAATAGTGATAGTAGAATTGAGAATTTGATTTGTGCTACTAAATCATTGAAATTTGGCTTAGAGAAATCAAAGGTTGTTGGGTTAGCATTAGAGAAAGCAGGGCCAAGGTTAGATGAGATTAGGGTAAGGTTGCCTTGGCTTGAATCTGCGGTTCGGCCGATTCGTGCTGAGAAGGATGCTCTTGTGGCGGTTGGAGGGCATATTAATAGGGCTGTTGGTCCTGCGGCTGCTGTTTTGAAGGTTTTCGATGCGGTTCATGGGCTTGAGAAGTCTTTGTTGTCGGATCCGCGGATTGATCTACCGGGTTACTTGTCGGTTTTGAAGCGTCTTGAGGAGGCGTTGAGGTTCTTGGGAGATAATTGTGGGTTGGCGATTCAATGGTTGGATGATATAGTTGAGTATTTAGAAGATAATTCGGTTGCGGATCAGGTTTATCTTAAGAATTTGAAGAAGGAGTTGGAGAGTCTTAAGGAATCGCAGAATGGTGATTTGGATGGTGGGTTGTTGGATGCTGCTTTGGATAAGTTGGAGAATGAGTTCAGATTGCTGTTAACTGAAAACAGTGTGCCGCTTCCTATGTCGTCGAATTCTCTTGGCGATCAGCCTTGCATCGCGCCTTCGCCTTTGCCTGTTTCGGTTGTTCACAAATTGCAGGCTATTCTTGGTAGATTGAGGGCTAATGATAGACTTGACAAATGTGTTTTGATTTACGTTGAAGTTAGAAGTTCTAATGTTAGGGCAAGTTTGCAGGCACTGAATTTGGATTACCTTGAGATCTCGGTGTCCGAGTTCAATGATGTGCAGAGCATAGAGGTGTATATAGCTCAGTGGGGAAAGCATTTGGAATTTGCGGTGAAGCATTTGTTCGAGGCGGAGTATAAGCTTTGTAATGATGTTTTCGAGAGGCTTGGACTCGATGTGTGGATGGGTTGTTTTTCAAAGATAGCTGCACAGGCTGGTATACTTGCGTTTCTTCAGTTTGGGAAGACCGTTACGGAAAGTAAGAAAGATCCTATTAAGCTTTTGAAGTTGTTGGATATTTTTGCGTCGTTGAACAAACTGAGGTTGGATTTCAACCGTCTTTTCGGGGGTGATGCATGTGTCGAGATCCAAAATTTGACAAGGGAACTTATCAAAAGTGTGATTGATGGCGCAGCCGAAATTTTCTGGGAACTTCTGGTTCAGGTAGAGTTACAGAGACAGAGCCCTCCTCCTCCCGATGGCAATGTTCCTCGACTGGTGAGCTTTATCACAGATTACAGCAATAAACTCTTGGGGGACGACTACAAGCCTATACTGACCCAAGTTCTGATCATTCACCGGAGTTGGAAGCGTCAAAGTTTTCAGGAGAAGCTTCTTGTTAATGAGATTTTGAACATATTGAAAGCCATTGAATTAAATTTGGATACATGGATCAAGGCTTACGACGATCCTATGTTGTCCAACTTTTTTGCCATGAACAATCACTGGCATCTGTTCAAACATTTGAAAGGGACGAAACTCGGGGATCTTTTAGGAGATTCTTGGTTAAAGGAACACGAACAATATAAGGACTATTACTCGACAATATTCTTGCGAGATAGCTGGGGAAAGCTCCCTGGACATTTGAGTAGAGAAGGGCTGATACTTTTCTCGGGAGGGCGTGCTACTGCTCGTGATCTCGTCAAGAAAAGATTGAAAAAGTTCAACGAAGTTTTCGACGAGATGTATTCCAAGCAATCGGGTTGGATCATGGTCGAGCGAGATCTGAGAGAGAAGACATGTCAGCTTATAGTCCAAGCCGTGGTGCCTGTTTACCGGAGTTACATGCAGAACTACGGTCCCTTGGTTGAGCAAGAAGCCAGTTCCAACAAATACGCAAAATACACAGTCCAAAAGCTTGAAGAAATGATTCTATGTCTTTACCGGCCGAAGCCTGCAAGACACAGCAGCTTGAGAAGTCCGCGGCTTAGTGGAAAATACGGCAACGGGATTCCAGATCTTCGTCGTACAACCTCTGCAGTTGTGTAG 2040 0.4417 MASASGSVGCNSDSRIENLICATKSLKFGLEKSKVVGLALEKAGPRLDEIRVRLPWLESAVRPIRAEKDALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRIDLPGYLSVLKRLEEALRFLGDNCGLAIQWLDDIVEYLEDNSVADQVYLKNLKKELESLKESQNGDLDGGLLDAALDKLENEFRLLLTENSVPLPMSSNSLGDQPCIAPSPLPVSVVHKLQAILGRLRANDRLDKCVLIYVEVRSSNVRASLQALNLDYLEISVSEFNDVQSIEVYIAQWGKHLEFAVKHLFEAEYKLCNDVFERLGLDVWMGCFSKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGDACVEIQNLTRELIKSVIDGAAEIFWELLVQVELQRQSPPPPDGNVPRLVSFITDYSNKLLGDDYKPILTQVLIIHRSWKRQSFQEKLLVNEILNILKAIELNLDTWIKAYDDPMLSNFFAMNNHWHLFKHLKGTKLGDLLGDSWLKEHEQYKDYYSTIFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMYSKQSGWIMVERDLREKTCQLIVQAVVPVYRSYMQNYGPLVEQEASSNKYAKYTVQKLEEMILCLYRPKPARHSSLRSPRLSGKYGNGIPDLRRTTSAVV 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04442 679 Pfam Exo70 exocyst complex subunit 286 641 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vifa3g04442 679 PANTHER EXOCYST COMPLEX PROTEIN EXO70 84 639 IPR004140 GO:0000145|GO:0006887
Vifa3g04442 679 FunFam Exocyst subunit Exo70 family protein 138 651 - -
Vifa3g04442 679 Gene3D Exocyst complex component Exo70 86 654 - -
Vifa3g04442 679 SUPERFAMILY Cullin repeat-like 88 645 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04442 Vifa-Chr3 1271533307 1271535346 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04442 1 679 EXO70 exocyst subunit family AT4G31540 73.121 0.0 1030
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04442 K07195 - gmx:100796139 1158.67