Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04425 ATGGATTCATGGTCTGATCTCCAGATCAAGAAAATGGAAGCCGGTGGTAACCGCAATCTCAATTCGTTTCTCTCTCAATACGGAATTCCCAAGGAAACAAATATTATAACTAAGTATAATTCTAACGCGGCTTCGATCTACCGCGATCGGATTCAGGCTCTCGCTGAAGGTCGCTCGTGGTGGGATCCGCCGGTTGTTAAGGAGAATGCTAATACTAATTCTCGATCTGGTAATGGTAATGGTAAGGGGAAGCCGCCTCTTGCTGCTGGTTCTAATGGAGGTTGGGATGATAATTGGGGTAATGATAATGATGATGGTTATGGATCTCACGGCGGTGGTGGTGATTTTCGGAGGAATCAGTCTACTGGTGATGTTATGGGGTTTGGTGGAGGAGGGATTGCACCGTCGCCCAGGTCGAAGTCGACGGAGGATATTTATACAAGGACACAATTGGAGGCTTCTGCTGCTAACAAGGAAGGGTTTTTCGCGAAGAAGATGGCGATGAATGGAGCGAGACCGGAGGGGCTTCCTCCCTCGCAGAGTGGGAAGTATGTTGGATTTGGATCTAGTCCAAATCCTTCTCAGAAGATGTCTAATCAAAGTGATTATTTATCTGTTGTTTCTGAGGGAATTGGTAAATTATCGATGGTTGCTCAGTCTGCAACCAAGGAGATCACTGCCAAGGTACAAGAAGAAGCGCAAAATGGACAAGTAGAATTGGAAAAACATGTCATCACAAAGACATTGACTAAGCCATCTGAGGCATATTATGATGCCAAAAACCTGCCACATGTTCTTGTGAGTACAAAAATATGTTTTGTGTGA 825 0.4497 MDSWSDLQIKKMEAGGNRNLNSFLSQYGIPKETNIITKYNSNAASIYRDRIQALAEGRSWWDPPVVKENANTNSRSGNGNGKGKPPLAAGSNGGWDDNWGNDNDDGYGSHGGGGDFRRNQSTGDVMGFGGGGIAPSPRSKSTEDIYTRTQLEASAANKEGFFAKKMAMNGARPEGLPPSQSGKYVGFGSSPNPSQKMSNQSDYLSVVSEGIGKLSMVAQSATKEITAKVQEEAQNGQVELEKHVITKTLTKPSEAYYDAKNLPHVLVSTKICFV 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04425 274 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 1 238 IPR044519 GO:0005096|GO:0016192
Vifa3g04425 274 MobiDBLite consensus disorder prediction 63 143 - -
Vifa3g04425 274 Gene3D - 198 272 IPR042087 -
Vifa3g04425 274 MobiDBLite consensus disorder prediction 66 80 - -
Vifa3g04425 274 Gene3D Arf GTPase activating protein 1 73 IPR038508 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04425 Vifa-Chr3 1266617752 1266619968 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04425 205 271 Core DNA Replication Machinery Family AT5G67100 43.590 7.43e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04425 K12492 - gmx:100778302 287.73