Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04057 ATGGATCCTAATCAATTTAATTATCAACAATCTATGTTCAATTTCATGCAAAATTTTCAAAATCCTAATCCTCAAAATTCTCAATTTCCATCGATGCCAACAAACTCTGCCTCTTTTTTTCCGTCATCAACCAGAAACACTCCGCCGCATTTTTTCCGTCACCAAACTCCACCAAATGGTCAACCATCTATGGAATTTTTTCATCATGAACTGGAAACACCGATTGTGTCTATTTCCGAAAGTCAAGTTCCACCATTTTCAACTCAAGTCGGTATTGAAAAAGAAGAAAGTCGCCCTGTTAAAAAAAAAGCTCGAGAGGTATTTTCAAGGGATGAAGATATACTTCTTATCCAATCATGGCTCAATGTTTCAAAGGATTCAATTGTGGGAGTTGATCAAAAAACTGAGAGTTTTTGGTTAAGAATCACTACCAATTATAACGAGTATCGTGGACAATCGCGGGAAAAGCTACGTGGGCAATTAAAATCTCGATGGCATCGAATAAATGGCTTGGTTCAAAAATTTGTTGGGTGTTACAAACAAGCTGTTAATGGAAAGAAAAGTGGGACTTCGGAGAAAGATATCTTGGCTGGTGCATATGTATTTTTTGCTCAAGATGAAGGTACACCATTCAATCTTGAGTACGCATGGCGATTGTTAAAGGATGAACCTAAATGGATGGGAGCATCGACCGAAAATTCTTCAAAAAGAACAAAGAATTCTGCTAGTGGGGCACACTCATCATCGTCTAACCTCGCGACACCTTCAAGTTATGATTTTAACTCATCATCACCAATGGAGCGTCCAATGGGACAACAAGCAGCAAAAAGGAAGAGTAAGGCAAAGGAAAATGCATCTGAATCACCTTCTAATGTTGTGCAAGTAACATGGAATAAAAGAGTAGCGACAATGAAAAGACTAGCTCAATGTAAGGAGGACGAGATGGAGTATAAGGCAATGCAATTAGTCTCGAAAGACACTTCTATGATGAATGATAGTCAACGAGATATTCATGAAAAATATTGTAATAAGTTGAAGAAAAAAAATATGGATTTTAGTTATGATGAAAAGATGTAG 1077 0.3723 MDPNQFNYQQSMFNFMQNFQNPNPQNSQFPSMPTNSASFFPSSTRNTPPHFFRHQTPPNGQPSMEFFHHELETPIVSISESQVPPFSTQVGIEKEESRPVKKKAREVFSRDEDILLIQSWLNVSKDSIVGVDQKTESFWLRITTNYNEYRGQSREKLRGQLKSRWHRINGLVQKFVGCYKQAVNGKKSGTSEKDILAGAYVFFAQDEGTPFNLEYAWRLLKDEPKWMGASTENSSKRTKNSASGAHSSSSNLATPSSYDFNSSSPMERPMGQQAAKRKSKAKENASESPSNVVQVTWNKRVATMKRLAQCKEDEMEYKAMQLVSKDTSMMNDSQRDIHEKYCNKLKKKNMDFSYDEKM 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04057 358 PANTHER - 92 348 - -
Vifa3g04057 358 MobiDBLite consensus disorder prediction 228 292 - -
Vifa3g04057 358 Pfam No apical meristem-associated C-terminal domain 210 336 IPR029466 -
Vifa3g04057 358 MobiDBLite consensus disorder prediction 228 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04057 Vifa-Chr3 1195652934 1195654010 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04057 101 280 Glutathione S-transferase Gene Family AT5G41240 38.220 4.64e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04057 - - cam:101493921 381.333