Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04004 ATGGGGTTTGGTGGAGGAGGGATTGCACCGTCGCCCAGGTCGAAGTCGACGGAGGATATTTATACAAGGACACAATTGGAGGCTTCTGCTGCTAACAAGGAAGGGTTTTTCGCGAAGAAGATGGCGATGAATGGAGCGAGACCGGAGGGGCTTCCTCCCTCGCAGGGTGGGAAGTATGTTGGATTTGGATCTAGTCCAAATCCTTCTCAGAAGATGTCTAATCAAAGTGATTATTTATCTGTTGTTTCTGAGGGAATTGGTAAATTATCGATGGTTGCTCAGTCTGCAACCAAGGAGATCACTGCCAAGGTACAAGAAGAAGCGCAAAATGGACAAGTAGAATTGGAAAAACATGTCATCACAAAGACATTGACTAAGCCATCTGAGGCATATTATGATGCCAAAAACCTGCCACATGTTCTTGTGAGTACAAAAATATGTTTTGTGTGA 450 0.4467 MGFGGGGIAPSPRSKSTEDIYTRTQLEASAANKEGFFAKKMAMNGARPEGLPPSQGGKYVGFGSSPNPSQKMSNQSDYLSVVSEGIGKLSMVAQSATKEITAKVQEEAQNGQVELEKHVITKTLTKPSEAYYDAKNLPHVLVSTKICFV 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04004 149 Gene3D - 71 147 IPR042087 -
Vifa3g04004 149 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 7 113 IPR044519 GO:0005096|GO:0016192
Vifa3g04004 149 MobiDBLite consensus disorder prediction 60 76 - -
Vifa3g04004 149 MobiDBLite consensus disorder prediction 44 76 - -
Vifa3g04004 149 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04004 Vifa-Chr3 1180195105 1180196946 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04004 80 146 Core DNA Replication Machinery Family AT5G67100 43.590 1.27e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04004 K12492 - egt:105952942 149.443