Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa3g03953 | ATGACCAAATCCAAAAATTTCTTTCATAATCTCATCAAGCCCTTCAAATTTGCTTCCAACAGAGAGGGAAGGAGCGAAGACGATATACAGAACATAGCTACACAGGAGCGAAGAACATTTTCCTATGAAACATTGGTTGCTGCTACCAACAACTTTCAAGCTATTAACAAACTTGGAGAGGGAGGATTTGGACCTGTCTACAAGGGTAAATTGAATGATGGGAGAGAGATAGCAGTGAAGAAGCTATCGCATGGTTCGAATCAAGGGAAGACACAGTTTGTTGCGGAGGCCAAGTTGTTGACTCGTGTGCAGCACCGTAATGTGGTGAATTTGTTTGGTTATTGTATCCATGGTAGGGAGAAGCTTCTTGTGTATGAGTATGTCCCTCGTGAGAGCCTTGACAAGTTCCTATTCAAATCAAAAAAGAAAGAAGGGCTAGATTGGAAACGTAGATTTGACATAATCAATGGAGTGGCAAGAGGTTTACTTTATCTTCATGAAGACTCTCACAACTGCATAATCCATCGTGACATAAAAGCAGCCAACATTTTACTTGATGAAAAATGGGTCCCTAAGATTGCTGACTTTGGCTTGGCTCGTCTCTTTCCAGAAGATGAAACTCATGTCAATACACGTGTGGCTGGAACACATGGATACATGGCTCCAGAGTATTTGATGCATGGACACTTATCTGTGAAGGCAGATGTGTATAGCTATGGAGTTTTGGTGTTGGAGTTGATTACTGGCCATCGAAACTCATCCTCTGACCCTGCCTTCAACGGAGACAATCTCCTTAATTGGGCATACAAGTTATACAAGAAAGGGAGGTGGTTAGAAATGGTAGACCCCACAGTGGCATCTTCAGTGGAGATAACAGAACAAGTGGAAGTGTGTATTCGAGTGAGTCTATTGTGCACACAAGGAGATCCACAACTTCGTCCAACGATGGCGCGTGTGGTATTGATGTTGTCTAAGAAGCCGCCAAGTCACATGGAAGAGCCAACAAGACCGGGTATACCTGGTTCTAGATACAGAAGAACAGTGCCTCGCAGTCACACCTCTTTTACTACCGATGATGAGAATGACTCCTCTGCTTCACACGTTGATTCAAGCAATTATGATACTACTATGGCTACTATTACGGCTACCAGTTCTACTTCTGCAACAAGAACAAGAACGAGCTCTGCCACTGCACAAGCAGATTTGCGTGGGAAACGTCCAATGCTATCTTCATGA | 1236 | 0.4345 | MTKSKNFFHNLIKPFKFASNREGRSEDDIQNIATQERRTFSYETLVAATNNFQAINKLGEGGFGPVYKGKLNDGREIAVKKLSHGSNQGKTQFVAEAKLLTRVQHRNVVNLFGYCIHGREKLLVYEYVPRESLDKFLFKSKKKEGLDWKRRFDIINGVARGLLYLHEDSHNCIIHRDIKAANILLDEKWVPKIADFGLARLFPEDETHVNTRVAGTHGYMAPEYLMHGHLSVKADVYSYGVLVLELITGHRNSSSDPAFNGDNLLNWAYKLYKKGRWLEMVDPTVASSVEITEQVEVCIRVSLLCTQGDPQLRPTMARVVLMLSKKPPSHMEEPTRPGIPGSRYRRTVPRSHTSFTTDDENDSSASHVDSSNYDTTMATITATSSTSATRTRTSSATAQADLRGKRPMLSS | 411 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa3g03953 | 411 | CDD | STKc_IRAK | 58 | 325 | - | - | |
Vifa3g03953 | 411 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 173 | 185 | IPR008271 | GO:0004672|GO:0006468 | |
Vifa3g03953 | 411 | MobiDBLite | consensus disorder prediction | 366 | 400 | - | - | |
Vifa3g03953 | 411 | Gene3D | Transferase(Phosphotransferase) domain 1 | 128 | 335 | - | - | |
Vifa3g03953 | 411 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 27 | 377 | - | - | |
Vifa3g03953 | 411 | Pfam | Protein tyrosine and serine/threonine kinase | 54 | 321 | IPR001245 | GO:0004672|GO:0006468 | |
Vifa3g03953 | 411 | Gene3D | Phosphorylase Kinase; domain 1 | 15 | 127 | - | - | |
Vifa3g03953 | 411 | SUPERFAMILY | Protein kinase-like (PK-like) | 36 | 350 | IPR011009 | - | |
Vifa3g03953 | 411 | SMART | serkin_6 | 52 | 323 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa3g03953 | 411 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 16 | 127 | - | - | |
Vifa3g03953 | 411 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 128 | 331 | - | - | |
Vifa3g03953 | 411 | ProSiteProfiles | Protein kinase domain profile. | 52 | 333 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa3g03953 | 411 | MobiDBLite | consensus disorder prediction | 326 | 411 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa3g03953 | Vifa-Chr3 | 1167347988 | 1167356192 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa3g03953 | 32 | 339 | Receptor kinase-like Gene Family | AT4G11530 | 50.968 | 3.36e-107 | 329 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vifa3g03953 | PK_Tyr_Ser-Thr | 3.6e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa3g03953 | - | - | mtr:11421623 | 711.064 |