Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03895 ATGGATATACAATATTGGGTTTGGATTTATGCCCTTTTGTTAGCAACCTATTTTTGTGTGATCAATTTTGTTTGGAGATTGAATGAGTTGTGTTATTATATGAAATTAAGAAAGAAACAATACCCTCTGCCTCCTGGTGATTTGGGATGGCCTTTTGTAGGAAATATGCTGGCCTTTATTAAACATTTCAAATCTGGTCATCCTGATTTGTTCATCAACAACCTTGTCTCCAAGTATGGACGAAATGGTATCTACAAGACACATTTATTTGGGACTCCAAGTATTATCATTTGTGATGCAGATATGTGTAGACGAGTGTTGACAGATGATGAGATTTTTAAAATCGGTTATCCAAAATCTACTATAGAAGTAGTGAGATGTAAATCTATTTGGAGTTTTTCGCGGGAAGAACACAAGCGTTTTAGACGACTAATCTCTTCTCTTACCATAGGCCATAATACATTAGAAACATACCTATCAAGTATGGAGGATATTGTGATTAATTCTCTAGAAGAAATTTCTCGTATGACTCACCCGGTTGAGTTTTTGAAAGAGATGAAAAATATTTCTTTTAATATTATTATCGATATTTTCTTGGGCTCTTACAATCAACATATTATTACCAAAATAGGAAACTCTTTCACCGAAATGCATAGTGCTTTGTTCTCTTTGCCCATTAATCTTCCGGGTTTTGCTTTTCGTAAAGGAATCATGGCACGTGAGAAGTTGGTGAAATTAGTTAAACCTATTGTTGAAGAAAGGAGGAGGATGATAAAACATGGTGAAAGGAAAGATCTACTTGATGTGTTTTTGGAAGCAAGGGATGAAGATGGTTGGAAATATGAGGATGAGGATATTATTGACATATTGATAGGGATTGTACTTGCTGGCCATGAAACTACAGCAAATAGTATGATGTGGTCAATGATATATCTTACACAAAATCCACATATTTTGGAAAAGGCCAAGGAGGAGCAAGAGGAAATTATGAAGACAAGGTTGTCCAACCAAAAACATTTAAGTCTTGAGGATATCAAGAAAATGACTTATCTTTCTCAGATAACCAATGAAATTCTGCGACTTAAGAATACCAACTTTGCAATATTTAGGGAGGCAACTATGGATGTTAACATCAACGGTTATACTATACCCAAAGGATGGAAAGTGTTAACTTGGTCAAGAGCTATACATATGGATCCTACATATTATCCAAATCCAAATGAATTCAATCCATCTAGATGGGATGATCATAATATTAAAATTGGAAGTTTCCTTCCTTTTGGTGCTGGAAGTAGACATTGTCCCGGAAGTGATTTGGCTAAAATTGAAATTTCTATATTTCTACATTATTTCCTTCTCAATTATAAACTTGAGTTAGTGAACCCAAAATGTCCAATTACTAATTTACCATCACCCAAGCCCATAGACATTTGTCTTGCTAAGGTGATAAAGGTTTCAAGTATTGCATAA 1470 0.3456 MDIQYWVWIYALLLATYFCVINFVWRLNELCYYMKLRKKQYPLPPGDLGWPFVGNMLAFIKHFKSGHPDLFINNLVSKYGRNGIYKTHLFGTPSIIICDADMCRRVLTDDEIFKIGYPKSTIEVVRCKSIWSFSREEHKRFRRLISSLTIGHNTLETYLSSMEDIVINSLEEISRMTHPVEFLKEMKNISFNIIIDIFLGSYNQHIITKIGNSFTEMHSALFSLPINLPGFAFRKGIMAREKLVKLVKPIVEERRRMIKHGERKDLLDVFLEARDEDGWKYEDEDIIDILIGIVLAGHETTANSMMWSMIYLTQNPHILEKAKEEQEEIMKTRLSNQKHLSLEDIKKMTYLSQITNEILRLKNTNFAIFREATMDVNINGYTIPKGWKVLTWSRAIHMDPTYYPNPNEFNPSRWDDHNIKIGSFLPFGAGSRHCPGSDLAKIEISIFLHYFLLNYKLELVNPKCPITNLPSPKPIDICLAKVIKVSSIA 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03895 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Vifa3g03895 489 PANTHER CYTOCHROME P450 26 39 470 - -
Vifa3g03895 489 CDD CYP90-like 76 482 - -
Vifa3g03895 489 Gene3D Cytochrome P450 33 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03895 489 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03895 489 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03895 489 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03895 489 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03895 489 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03895 489 SUPERFAMILY Cytochrome P450 37 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03895 489 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03895 489 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03895 489 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03895 489 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03895 489 Pfam Cytochrome P450 44 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03895 Vifa-Chr3 1150485264 1150487676 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03895 7 482 Cytochrome P450 AT1G05160 45.625 1.28e-161 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03895 K04123 K17875 ag:BAG68929 641.728