Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03881 ATGCAGCAAAACAACAACAAAAACCCATCAATCTCACTCCACAACACTCACGTCAAGCTCCTCGCCTTCGACCTCCTAACCCTAACCCCACCCTCCTCCCCCGACCAACCCTTCACCCGCAAATCCATCCCCATCACCCGCCTCGAAACCCTAGGAACCATCACCCTCCGCGATCACAAACCCTCTAAATTCCTCCGTTTCTCCATCGACGATGGAACTGGTTGCATCCCTTGTATCCTCTGGCTTAACCACTTGACTTCCCCTCACATCGCTCGCCGCCGTAGTCCGCAGGATGTTTGTCTGCTCGCCGACGCTGCTGCGAGATCTGCGGAGGTTGTGAAGGTCGGGGCTGTTGCTAGGGTTAGGGGGAGGGTTACGGTTTTTAAGGGGAGTGTGCAGGTTACTGTGACGGATGTTGTTGGTGAAAGGGATCCTAATGCGGAGGTTTTGCATTGGGTTGATTGTGTTAATTTGGCTCGTAACTGTTATAATCTTGTTACTCTTTCTTCTTAG 513 0.5224 MQQNNNKNPSISLHNTHVKLLAFDLLTLTPPSSPDQPFTRKSIPITRLETLGTITLRDHKPSKFLRFSIDDGTGCIPCILWLNHLTSPHIARRRSPQDVCLLADAAARSAEVVKVGAVARVRGRVTVFKGSVQVTVTDVVGERDPNAEVLHWVDCVNLARNCYNLVTLSS 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03881 170 Gene3D - 12 166 IPR012340 -
Vifa3g03881 170 SUPERFAMILY Nucleic acid-binding proteins 34 157 IPR012340 -
Vifa3g03881 170 Pfam OB-fold nucleic acid binding domain 52 139 IPR004365 GO:0003676
Vifa3g03881 170 PANTHER REPLICATION PROTEIN A-RELATED 6 163 IPR040260 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03881 43 158 Core DNA Replication Machinery Family AT2G24490 25.862 4.04e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03881 K23312 - csin:114287844 204.527