Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03876 ATGATTCCGAATTTGAACTTGGAAGCTGAAAATAGTTTAGAAGAAAGTAGCCAAGTAGGTTCCAACATTTACTTACAAGAAACAACATCTTATGATGTTACCAAAGACAGTGCAACAACTTCCTGTCTTACAAATCTTCCAGATTCTGTGTCCCTTGACCTGACTCTCACATTCGATCCGAGCGACGAAGAATTCAAGGAAACAAGCGACACGAACAGCGAAATAGTAGGAGCTGGTCGGGCTAATATCACCACCGCGCCAGCGCCACTGGTTCATAGAGTTTTCTCTTGTAAGTATTCTAAGAGGAAGTTCTTTAGCTCGCAAGCGTTAGGAGGACACCAGAACGCTCATAAAAGGGAGAGAACGATGGCGAAGCGCGCTATGCGAATGGGAATGTTTACCAAGAGGTATACAAGCTTAGCTTCTTTACCTCTTCATGGTTCTTCTCCTTTTCATTCTCTTGGTATTCAAGCACATTCTGCAATGCATTACAATCACATGCCATCGCCATCGTTGTCGTCTCTGAGGGCTAATGATATGAGAGCCATAACGAAATTCGAGAATGAGTATTTCGGAGCAGCGCCAATGTTTATGCATAACGACGACACGGGTGTGTTTTGGCCGGGAAGTTTCAGACAGGTAGATCAAAGTGTTCATGGTCATAATTCAAATATGAATACTGGTTTTGTTGTAGCAATAGCAACAGAACCTCCTCAACAAACATCTACTGTATCTCCTGATCTCACTCTCAGGCTTTAA 759 0.4295 MIPNLNLEAENSLEESSQVGSNIYLQETTSYDVTKDSATTSCLTNLPDSVSLDLTLTFDPSDEEFKETSDTNSEIVGAGRANITTAPAPLVHRVFSCKYSKRKFFSSQALGGHQNAHKRERTMAKRAMRMGMFTKRYTSLASLPLHGSSPFHSLGIQAHSAMHYNHMPSPSLSSLRANDMRAITKFENEYFGAAPMFMHNDDTGVFWPGSFRQVDQSVHGHNSNMNTGFVVAIATEPPQQTSTVSPDLTLRL 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03876 252 ProSiteProfiles Zinc finger C2H2 type domain profile. 95 122 IPR013087 -
Vifa3g03876 252 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 27 188 IPR044246 GO:0009788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03876 Vifa-Chr3 1142602721 1142603479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03876 93 252 C2H2 Transcription Factor Family AT1G66140 42.857 2.93e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03876 - - psat:127096958 401.749