Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03855 ATGGTCAAGGAGCTAGGAAAAGGAAAAATCCATTTGAAGAAACGTTTTCAAAATGATATGTCCATAAACAATAATGTGATAGATGTTTTACAAGATCAAAAGTGGGCGCCTATGCCCTGGAAAAAGTTGCAGGTCGGAGATATTATCAAGATGTTGGTTATCAGGTCCTCGGTGGCTGCAATCCTCCTAACATATGTGATGATGAATTCAATGAATGTTCCTTCCAAAAGAAGTACACTAGAGAGGAAACTTGACAAGCTCATACTCGCTCTCTTTGCAACACTCTTTATGATGTGTTTCATTGGAGCCATAGGCAGCGCTATTTTTGTGAACAAAAAATACTTCTATTTACATCTTGATTCATCAGAGGAGGGCTCAGCACAGTTCAATCCAAAAAACAGATTTCTGGTTTTTATCCTGACTATGTTTACCCTTATCACACTGTATTCAACAATCATCCCAATTTCACTTTATGTGTCTATAGAGATGATAAAATTTATTCAATCAACTCAATTTATCAACAAGGATTTGGGAATGTACCACAATGAAACTAATACACCGGCACTGGCCAGAACTTCAAATCTGAATGAAGAACTTGGACAGGTGGAATACATTTTCTCTGACAAAACTAGGACCCTAACAAGAAACTTAATGGAGTTCTTCAAGTGTTCGATAGGAGTAGAGGTCTATGGAAATGGTGTGACTGAAATTGAGAGAGGACTAGCAGAGCGCAATGGCATGAAAATTGAGTAA 753 0.3772 MVKELGKGKIHLKKRFQNDMSINNNVIDVLQDQKWAPMPWKKLQVGDIIKMLVIRSSVAAILLTYVMMNSMNVPSKRSTLERKLDKLILALFATLFMMCFIGAIGSAIFVNKKYFYLHLDSSEEGSAQFNPKNRFLVFILTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLGMYHNETNTPALARTSNLNEELGQVEYIFSDKTRTLTRNLMEFFKCSIGVEVYGNGVTEIERGLAERNGMKIE 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03855 250 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 14 51 - -
Vifa3g03855 250 SUPERFAMILY Calcium ATPase, transmembrane domain M 71 200 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03855 Vifa-Chr3 1135166779 1135170663 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03855 14 88 Primary Pumps ATPases AT1G59820 41.379 6.93e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03855 K14802 - gmx:100815547 351.288