Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03853 ATGAATAAGAAGAAGGTGAATCGTTCTCGTACAAAAACAAAGATCGGTGATTTAAAGAAGGAACGCAACCAAGATGTCGAGGGGTGTCAGAGTTCATCTCTGGTAGATGAAACGAAGAATGTAAATCATGTGAGTTTCATTCAACAGAAAATTGTTGAAGCTGAAGACAAATTGGAGAAGCTGAGAAAAGAAAATCGTAAGAAAGAGATGGATCTTCTTATGATCAAAAGCATTCAAAATCCAGCTATGTTAGACAATCTCACTATGGACGAGTCAATTGAACTCAAAAAGATGATAGATGAGAAAATTAAGGAGATCGATGCTAAGATTGCTTCACTCGATTGA 345 0.3623 MNKKKVNRSRTKTKIGDLKKERNQDVEGCQSSSLVDETKNVNHVSFIQQKIVEAEDKLEKLRKENRKKEMDLLMIKSIQNPAMLDNLTMDESIELKKMIDEKIKEIDAKIASLD 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03853 114 Coils Coil 44 71 - -
Vifa3g03853 114 MobiDBLite consensus disorder prediction 1 23 - -
Vifa3g03853 114 Coils Coil 96 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03853 Vifa-Chr3 1135024769 1135025205 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03853 23 110 MADS-box Gene Family AT5G26630 30.337 5.00e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03853 - K20913 psat:127094664 127.102