Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03843 ATGGCTCACCATTATTCTAATAAGGTCATAGGTTGCTTTCTTTTGTTTTCATTTTTTGTTTCTTCTTCTTTAACCTTTACCTATGGCCAAAGTCATTTTCTCATTGATCCAATAATTATTCCCGGTGATGATCTCTCATCATCAGGAAATGATTTTGGTGTTGGTGATGCTCCAGCTCAATCACCCGAGCCGTTGATCGGTGATTCTCCCGCTCCTTCGCCTGCAAATTCTGAAAATGGAACTCTTGACAAATGTTTTCCTAATGAGAGGCTAAAACAGTCTTATGTTGCATTTCAAGCATGGAAAAAAGCTATTTATTCTGACCCTTTTAACACAACTTCTAATTGGGTTGGTCCTGATGTTTGTTCTTATAATGGTGTGTTTTGTTCTCCTGCTCTTGATGATCCTACATTGAATGTTGTTGCTGGTGTTGATATTAATCACGCGGATATCGCCGGTCACCTTCCGGAAGAGTTAGGACTATTGAATGACACTGCTCTTTTCCATATTAACTCAAATAGATTCTGTGGTATTATTCCTGAAAGCTTTAAGAATCTAACCCTTATGTATGAGTTTGATATCAGTAACAACCGCTTCGTCGGTGAATTTCCATTAGTGGTGTTAAAATGGAAAAATTTGAAGTTTTTGGATATTAGATTCAATGATTTTGAAGGAGTTTTACCTCCTGAGCTATTTGAGAAAGAACTTGATGCAATATTTTTGAACAACAACCGTTTCACATCACATATACCGGAAACACTTGGAAAATCACCAGCCTCTATTGTGAGCTTTGCAAACAATCATTTTACAGGTTGTATTCCAAAATCAATTGGAAACATGAAGAACTTGAATGAGATTGTTTTCTTAGGAAATGGTCTTGGTGGTTGTTTTCCACAAGAGATTGGGTTGTTAGGGGAAGTGATAGTTTTGGATGCTAGCAAAAATGGGTTTGTTGGGACACTACCAAAGTTGGTTGGATTGAAGAATGTTGAGGTTATTGACATAGGACATAACAAGTTTAGTGGTTATGTTTCTAACACTATTTGTCAACTACCTAGGAAGAATCAAAAGACATCTAAACAATGTTTGCCTGTTTTGACTAGACCTGTGGATTGTAGCAAAAGTTGTGATGGAGGAAAAGGGAAGAGTCATGGTCCTTCAACACCTAAACCAACTCCTTCAAATCCATCAAAGTCTCACCCACCTAAGGTGGAGACACCAAAGGCTCCACCACCACAAATTCCACCGACACTTCCTCCAGTTGAGGATATTCCACCTATGCTACCACCGGTTGTGGATATTCCACCAACACTTCCACCGGTTGAGGATATTCCACCTATGCTACCACCAGTTGAAGATATTCCACCAACTGTTTCCCCAGTGTTGTCATCACCACCACCACCGGCACCGGTTGAGCACAATCCACCTATGCTACCACCAGTTGAAGATATTCCACCAACTGTTTCTCCGGTGTTGTCATCACCACCACCACCGGCACCAGTTGAGCACAATCCACCTATGCTACCACCAGTTGAAGATATTCCACCAACTGTTTCTCCGGTGTTGTCATCACCACCACCACCGGCACCAGTTGAGCACAATCCACCTATGCTACCACCAGTTGAAGATATCCCACCAACTGTTTCCCCAGTGTTGTCATCACCACCACCACCGGCACCAGTTGAGCACAATCCACCTATGCTACCACCAGTTGAAGATATCCCACCAACCGTTTCTCCAGTGTTGTCATCACCACCACCATCACCGGTTGAGCACATTCCTCCTATGCTACCACCCGTTGAAGATATTCCACCAACCGTTGCACCAGTGTCATCACCACCACCGGTTGAGCACACACCTATGCTACCACCAGTTGAAGATATTCCACCAACTGTTGCACCAGTGTCTTCACCACCACCACCAGTTTTCTCTCCTCCACCACCCTCACCTGCCTACTCCCCTCCTCCGCCAGTTAACTCTCCACCACCACCACCAGTGTACTCCCCTCCACCACCCCCGCCAGTCCATTCTCCCCCTCCACCAGTTTATTCTCCACCACCACCAGTTTACTCTCCTCCTCCACCACCACCAGTCAACTCTCCCCCACCACCAGTTCACTCTCCACCCCCACCAGTCCATTCACCACCACCTCCGGTTCACTCTCCTCCCCCGCCAATCCATTCTCCCCCTCCACCAGTTTATTCTCCACCACCACCAGTTTACTCTCCTCCTCCACCACCACCAGTCAACTCTCCCCCACCACCAGTTCACTCTCCACCCCCACCAGTCCATTCACCACCACCTCCAGTTCATTCTCCTCCCCCGCCAGTCCACTCACCACCACCTCCAGTTCACTCTCCACCCCCGCCAGTCCATTCTCCTCCACCTCCAGTTCACTCTCCTCCCCCACCAGTCCATTCTCCACCACCTCCAGTTCACTCACCACCCCCACCAGTTCATTCTCCTCCTCCACCGGTCTATTCACCACCACCACCAGTACACTCACCTCCTCCCAGAGTCAACTCACCTCCACCACCGGTCAATTCACCACCACCACCAACATGGGATGACATCACACTACCACCAAACATTGGAGCTGAATATAGGTCACCTCCTCCTCCAACAATTGCTGGATACTAA 2640 0.467 MAHHYSNKVIGCFLLFSFFVSSSLTFTYGQSHFLIDPIIIPGDDLSSSGNDFGVGDAPAQSPEPLIGDSPAPSPANSENGTLDKCFPNERLKQSYVAFQAWKKAIYSDPFNTTSNWVGPDVCSYNGVFCSPALDDPTLNVVAGVDINHADIAGHLPEELGLLNDTALFHINSNRFCGIIPESFKNLTLMYEFDISNNRFVGEFPLVVLKWKNLKFLDIRFNDFEGVLPPELFEKELDAIFLNNNRFTSHIPETLGKSPASIVSFANNHFTGCIPKSIGNMKNLNEIVFLGNGLGGCFPQEIGLLGEVIVLDASKNGFVGTLPKLVGLKNVEVIDIGHNKFSGYVSNTICQLPRKNQKTSKQCLPVLTRPVDCSKSCDGGKGKSHGPSTPKPTPSNPSKSHPPKVETPKAPPPQIPPTLPPVEDIPPMLPPVVDIPPTLPPVEDIPPMLPPVEDIPPTVSPVLSSPPPPAPVEHNPPMLPPVEDIPPTVSPVLSSPPPPAPVEHNPPMLPPVEDIPPTVSPVLSSPPPPAPVEHNPPMLPPVEDIPPTVSPVLSSPPPPAPVEHNPPMLPPVEDIPPTVSPVLSSPPPSPVEHIPPMLPPVEDIPPTVAPVSSPPPVEHTPMLPPVEDIPPTVAPVSSPPPPVFSPPPPSPAYSPPPPVNSPPPPPVYSPPPPPPVHSPPPPVYSPPPPVYSPPPPPPVNSPPPPVHSPPPPVHSPPPPVHSPPPPIHSPPPPVYSPPPPVYSPPPPPPVNSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPVHSPPPRVNSPPPPVNSPPPPTWDDITLPPNIGAEYRSPPPPTIAGY 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03843 879 Gene3D Ribonuclease Inhibitor 95 259 IPR032675 -
Vifa3g03843 879 Gene3D Ribonuclease Inhibitor 260 363 IPR032675 -
Vifa3g03843 879 MobiDBLite consensus disorder prediction 51 82 - -
Vifa3g03843 879 MobiDBLite consensus disorder prediction 459 858 - -
Vifa3g03843 879 SUPERFAMILY L domain-like 97 353 - -
Vifa3g03843 879 MobiDBLite consensus disorder prediction 459 879 - -
Vifa3g03843 879 FunFam Leucine-rich repeat extensin-like protein 1 95 256 - -
Vifa3g03843 879 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 48 353 - -
Vifa3g03843 879 MobiDBLite consensus disorder prediction 373 427 - -
Vifa3g03843 879 MobiDBLite consensus disorder prediction 389 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03843 Vifa-Chr3 1130758798 1130761552 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03843 1 374 Trihelix Transcription Factor Family AT3G19020 54.785 5.39e-152 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03843 - - aprc:113870095 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03843 3 1130758798 1130761552 Vifa3g03843 3 1130758798 1130761552 ECH