Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03833 ATGGCATCCTCAGAACGAAAACAATCTTCCTTCACAACCACCACCAACAACAAGCTCCCACTAAAACAAATCCCTGGCAGCTATGGCCCCCCCTTCTTCGGACCGATCTTGGACCGACACGATTATTTCTACAACCAAGGAAGAGACAAATTCTTCTCATCAAGAATCCAAAAATACAATTCAACAATCTTCAGAACCAACATGCCACCAGGTCCATTCATTTCCTCAAACCCAAGAGTCATTGCCCTCTTGGACGCAGCTTCCTTCCCGATCCTCTTCGACAACGGAAAAGTCGAGAAACACAACGTCTTCGACGGTACCTTCATGCCGTCGACAAACTTCACCGGTGGCTACCGTGTCTGTTCACAGTTAGACACAACTGAACCAAGCCATGCTCTTATCAAAGGTTTCTTTCTTAATCAACTATTGTTGAGAAAAGACTCATTTGTCCCTCTCTTTAGAAGCATACTTTCTGAAGCTTTTAATGAGATTGAAGAAGGGCTTTCTGGTAAAAATGGTCCTAAAATGTGTGACACATGGATTCTCTTTCAACTTTTTCCAATTGAAACCCTAAAACTTCCAAAGATTTTCAATTATCTTGAAGATCTCTTGCTACGTACTGTTCCATTTCCTGCTTGTTTGACAAGTTCCTCTTACAAGAAGCTCTACGAAGCATTTTCTTCTTCAGCTGTAACACTTTTAAATGAAGCAGAAAAAGCAGGATTGAAAAGAACTGAAGCATGTCACCAGCTCATTTTTATAGCTTGTTTCAACTCATATGGCGGATTCAAGAATCAGTTCCCAACACTCTTCAAATTGGTAGGTTTAAGCGGCCAAGAGCTGCACAAAGAACTCGCAAACGAGATAAGAACCGTCGTGAAACAAGAAGGTGGAGTAACAATTCAGGCATTGGAAAAAATGGCATTAGTAAAATCTGTTGTTTATGAGACTATGAGGATTGAACCGATTGTTCGTTATCAATATGCAAAAGCAAGAGAGGATTTGATTGTGAAGAGTCATGATGCTGCTTTTGAAGTTAAAAAGGGTGAGATGTTATTTGGATACCAACCTTTTGCTACTAAGGATCCTAGGATTTTCGATGATGCTGAGGTTTTTGTTCCAAAGAGGTTTGTTGGAGAAGGTGAAAAGTTGTTGAAGTATGTTTTGTGGTCGAATGGGAAAGAAACAGATGAGCCTTCTGTGGATAACAAGCAGTGTCCTGGGAAGAATCTTGTTGTGCTTTTGTGTAGATTGTTCTTGGTTGAGTTTTTCTTGAGGTATGATACTTTTACGTTTGAGACTAAAGAAGCTGTTGTGGGTGTTAATATTACTATTACTTCACTCACCAAGGCTTCTTCTACCTGA 1365 0.4029 MASSERKQSSFTTTTNNKLPLKQIPGSYGPPFFGPILDRHDYFYNQGRDKFFSSRIQKYNSTIFRTNMPPGPFISSNPRVIALLDAASFPILFDNGKVEKHNVFDGTFMPSTNFTGGYRVCSQLDTTEPSHALIKGFFLNQLLLRKDSFVPLFRSILSEAFNEIEEGLSGKNGPKMCDTWILFQLFPIETLKLPKIFNYLEDLLLRTVPFPACLTSSSYKKLYEAFSSSAVTLLNEAEKAGLKRTEACHQLIFIACFNSYGGFKNQFPTLFKLVGLSGQELHKELANEIRTVVKQEGGVTIQALEKMALVKSVVYETMRIEPIVRYQYAKAREDLIVKSHDAAFEVKKGEMLFGYQPFATKDPRIFDDAEVFVPKRFVGEGEKLLKYVLWSNGKETDEPSVDNKQCPGKNLVVLLCRLFLVEFFLRYDTFTFETKEAVVGVNITITSLTKASST 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03833 454 Pfam Cytochrome P450 279 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03833 454 MobiDBLite consensus disorder prediction 1 22 - -
Vifa3g03833 454 PANTHER CYTOCHROME P450 26 19 427 - -
Vifa3g03833 454 MobiDBLite consensus disorder prediction 1 23 - -
Vifa3g03833 454 SUPERFAMILY Cytochrome P450 19 435 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03833 454 CDD CYP74 54 446 - -
Vifa3g03833 454 Gene3D Cytochrome P450 15 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03833 Vifa-Chr3 1126525312 1126527955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03833 12 452 Cytochrome P450 AT5G42650 48.529 6.68e-162 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03833 K01723 - gmx:100801764 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03833 3 1126525312 1126527955 Vifa3g03833 3 1126525312 1126527955 ECH