Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03828 ATGGGGAAAGAAGAATTCAATCCATTTGGGAGACCTTACAATTTTCTTGTGCCTCAGGATCAAAGTCCAAACCAACCTATGCACCCACATTGGTCTACAACTATGCATGCTTATTACAATCCTGGGTCTGCGCCAAATCCCTATTATAATCCACTTGCAGCTGGTCCTTACTTGTATCAGCAGTACATGTGGCAAAATCAGGCACAGGCAAGCAATGCACTACTTCATTGTGATGCTCTAAATGATCCCACAAGGCTCTCCAATAAACCTAAGGATGCTACTCTGGCCTTTTCAGAAATGGCACGCAGGAGGAATATTGGCGAAGGAAACTCAGACTTCAACAAATTATTTATCGGAAACTCACAACCATTAAGTTTAATAACTGGGAATTCGAGAGAATATGGAAACCCATCTTCATTGCCAAAGAGTGACAGGGATGGAACCTTAATGAGTGTGCCAAGTGGAAGCAAGAGATTTCCAGGTGAAGAACAAGAGGGCATTAACAATGTTGTTTTTCCTTTAAGTATGACACTGAAACCTAACATGATTATTGGGGATGGAAATCCATCTGGGCTGACTCAGAATTTGGAGACATTCGTCAAGGAATCTCGTGCTGATGATGATGCTGATACGCAACTAAAAAATATGGAAGGTGATGATATAAGAAAAGAAAGGAAAAGACAGTCAAACAGGGAATCAGCTAAGAGATCAAGGATGCGAAAACAGCAAGAATGTGAAGAGCTATGTAAAAAGATAGACACTCTGAAGGATGAAAATTCCGCCCTAACACAAAGGCTCGTTACACTTTCTGAGGAATGTATGGAGCTCACCACTGAAAACAATTCCATCGAGGAAGAGCTAATTAAGATGTATGGAGCAGACTCAATTGCAGATCTTTTGCTCATGAAGCCTGTTTGA 918 0.4118 MGKEEFNPFGRPYNFLVPQDQSPNQPMHPHWSTTMHAYYNPGSAPNPYYNPLAAGPYLYQQYMWQNQAQASNALLHCDALNDPTRLSNKPKDATLAFSEMARRRNIGEGNSDFNKLFIGNSQPLSLITGNSREYGNPSSLPKSDRDGTLMSVPSGSKRFPGEEQEGINNVVFPLSMTLKPNMIIGDGNPSGLTQNLETFVKESRADDDADTQLKNMEGDDIRKERKRQSNRESAKRSRMRKQQECEELCKKIDTLKDENSALTQRLVTLSEECMELTTENNSIEEELIKMYGADSIADLLLMKPV 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03828 305 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 225 240 IPR004827 GO:0003700|GO:0006355
Vifa3g03828 305 MobiDBLite consensus disorder prediction 202 243 - -
Vifa3g03828 305 CDD bZIP_plant_GBF1 223 274 IPR045314 GO:0003700|GO:0006355
Vifa3g03828 305 Coils Coil 231 286 - -
Vifa3g03828 305 SUPERFAMILY Leucine zipper domain 221 277 IPR046347 GO:0003700|GO:0006355
Vifa3g03828 305 Gene3D - 210 289 - -
Vifa3g03828 305 PANTHER G-BOX-BINDING FACTOR 3-RELATED 21 291 IPR044827 GO:0003700|GO:0006355|GO:0043565
Vifa3g03828 305 MobiDBLite consensus disorder prediction 128 164 - -
Vifa3g03828 305 SMART brlzneu 218 282 IPR004827 GO:0003700|GO:0006355
Vifa3g03828 305 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 220 283 IPR004827 GO:0003700|GO:0006355
Vifa3g03828 305 Pfam bZIP transcription factor 220 280 IPR004827 GO:0003700|GO:0006355
Vifa3g03828 305 MobiDBLite consensus disorder prediction 128 145 - -
Vifa3g03828 305 FunFam BZIP transcription factor 220 271 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03828 220 287 bZIP Transcription Factor Family AT2G35530 47.059 1.10e-16 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vifa3g03828 bZIP_1 4e-16 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03828 K09060 - gmx:102665715 268.085