Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03807 ATGGCTTCATCACCATTATTATTCACAGTGAGGAGGTTCCAACCAGAGTTGGTGCTTCCAGCTGCTTCAACTCCTCGAGAAGTTAAACTGCTATCTGACATAGATGATCAACAAGGTGTCATGTTCGTTGAAGCTGAAGCTGATGTAACACTTGACCAATTTGGTGACTCTCTCCATCCACCATTCCCTTGCTTCCAAGAACTTCTCTATGATGTTACTGGCTCGGAACTAATTATTGATCGCCCCCTTCGACTCATACAAGTGACACGTCTCAAGTGCGGTGGTTTCATAATAGTAATTAATTTGAACCATATCATGAGCGATGCAATTGGTTTAAAACAGTTCGTGAATGCTTGGGCAGAAATGGCTCGAGGAGAACATCAACCTTCGATTCAACCTGTCTGGCATAGAGAGATTCTCATGGCAAGAAAGCCACCACGCATTACATGCAATCATCCTGAATACGAACAAATACTTCCATCAAATATCATCAAAGAAGAAGATACTGCTACCACCATAGTACATCAACCTTTCTGCTTTAGACCTTCAGACATAGCTGCAATTCGTCTCTTGGTTCCATTTCAATGCACCACATTTGATCTTATTGCAGCATGTTTTTGGTACTGTCGCACAAAAGCATTGCAGTTAGAGCCAGAGAAGGAAGTACGAATAATGTACCCCGTCAATGCACGTTCAAGGTTTAAGAATAATCGTTCATCATTTGTTGGATATTATGGTAATTGTATTGCTTTCCCGGCGGCTGTAACCACCGCAGGGAAGCTTTGCGGGAACTCACTAGGTTATGCAGTAGAATTGATAAGAAAGTTAAAAGGACAAGTTACAGAAGAATACATCCAATCAGTGGCAGATCTTATGGTTATTAAGGGACGATGTTCATATACAACCTTAAGGTCTTGTCTTATTACAGATTTGAGTCGTTTTAAATTTAACCAAGTGAATTTTGGATGGGGTGAAGGAGTGTATGGTGGAAATGCAAGAGGTGGGGCTGATTTTTTTCATGGAGCAAGTATTATTGTTTCACATAAAAATTCAAAAGGAGAAGAATGTTTGATATTAACAATTCGCTTGCCTTTAGAAGAGATGAAAAGATTTAAAAAAGAGTTAGATGAGATGCTTGATAGGAATAATCAACCTACAAGGAGTGTTTCTAGTTTTGTGAAGTCTACCTTATAG 1194 0.3961 MASSPLLFTVRRFQPELVLPAASTPREVKLLSDIDDQQGVMFVEAEADVTLDQFGDSLHPPFPCFQELLYDVTGSELIIDRPLRLIQVTRLKCGGFIIVINLNHIMSDAIGLKQFVNAWAEMARGEHQPSIQPVWHREILMARKPPRITCNHPEYEQILPSNIIKEEDTATTIVHQPFCFRPSDIAAIRLLVPFQCTTFDLIAACFWYCRTKALQLEPEKEVRIMYPVNARSRFKNNRSSFVGYYGNCIAFPAAVTTAGKLCGNSLGYAVELIRKLKGQVTEEYIQSVADLMVIKGRCSYTTLRSCLITDLSRFKFNQVNFGWGEGVYGGNARGGADFFHGASIIVSHKNSKGEECLILTIRLPLEEMKRFKKELDEMLDRNNQPTRSVSSFVKSTL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03807 397 Pfam Transferase family 37 377 - -
Vifa3g03807 397 Gene3D - 157 375 IPR023213 -
Vifa3g03807 397 Gene3D - 33 156 IPR023213 -
Vifa3g03807 397 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 33 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03807 Vifa-Chr3 1116363824 1116365281 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03807 39 378 Monolignol Biosynthesis Gene Families AT5G48930 27.500 1.52e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03807 K19861 - gmx:100792864 423.32