Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03792 ATGAATGTGCACCACATCACCAGCAAAAAATTTAGCAACTATGGGAAAGGATCTGATTTCCCTGAGATTTTTGATGTTTTCGGCGTTGGTATATTCAATTTGGATTCCAATGAATGGAAACAAGAGAGGGCACTGCTTCATTCATTGCTTAAAAGGAAAAGCTTTGAGATTTTCCATCAAAATATCATTCAAAAGAAGCTAGAGAATTGCCTATTACCACTTCTTGATCTTTCATGCGAAGGTGTACAAGTAATTGATTTACAAGATATTCTTGAGAGGTTCACCTTTGACATCGCGTGTACCTTTTTATTTGGATTTGATCCAAATTCCCTTCCTTACAACTTGAATGAATTTGCAGATGTTGCTTATATGAAAGCAATCTCTGTGCTTGATGATACGCATTTGATCAGACACTGTATTCCAAAATGTATTTGGAAGCTACAAAAATGGCTTCAAATAGGTCAAGAAAGGAAGAGAAAGGTAGCTCGAGAAAATCTTCACCAATTCTTGTACGAGTGTATAACTTATTCGGAAGATGAAAAAAAAATTGGTGTGGAAGAATATCATCCATGCTTGCTAAAAGAATTAATGAAAAGAGACTTGAAAAATGATGAAATGTCTAAGAAGCATTATCTTAGAGACACTGCACTCAATCTCTTGGCTGCAGGAGATGGACCAATTAGTTCAGGTCTCAGTTGGTTCTTTTGGCTTGTTTCAACTCATCCTATTGTGGAAGCTAAAATTGTTCAAGAGATCAAAGATAACTATTTAGCACAAGAGGAGAATTTTATTACGAATTTAAATACGGAACAACTCGATAAATTAGTTTATCTTCATGGAGCTATATGTGAAGCCTTGAGGCTTTATCCTCCTGTGCCATTTGAGCACAAGTGTGCAGTCAAATCTGATGTACTACCTAGTGGACACCATGTTAGTCCAAATACAAAGTTAATATATTCTTTGTATGCAATGGGAAGGATGGAAGAAATATGGGGAGAGGATTGCTTGGAGTTTAAGCCAGAGAGATGGATATCAGATAATGGACATATTATACATGTGCCATCTTACAAGTTCATAGCATTCAATGCAGGTCCAAGAAGTTGTATTGGAAAAGGTATTAGCCTTATTCAAATGAAAATGGTTGCAGCTGCTATGTTATGGAGGTTTCACATACATGTTGTGGAAAGTCAATCTGTAACACCAAAGATTTCTATTGTTCTTCGCATGGAACATGGCTTAAAGGTCAAAGTTAGTAAAAGATGCATCTGA 1269 0.3617 MNVHHITSKKFSNYGKGSDFPEIFDVFGVGIFNLDSNEWKQERALLHSLLKRKSFEIFHQNIIQKKLENCLLPLLDLSCEGVQVIDLQDILERFTFDIACTFLFGFDPNSLPYNLNEFADVAYMKAISVLDDTHLIRHCIPKCIWKLQKWLQIGQERKRKVARENLHQFLYECITYSEDEKKIGVEEYHPCLLKELMKRDLKNDEMSKKHYLRDTALNLLAAGDGPISSGLSWFFWLVSTHPIVEAKIVQEIKDNYLAQEENFITNLNTEQLDKLVYLHGAICEALRLYPPVPFEHKCAVKSDVLPSGHHVSPNTKLIYSLYAMGRMEEIWGEDCLEFKPERWISDNGHIIHVPSYKFIAFNAGPRSCIGKGISLIQMKMVAAAMLWRFHIHVVESQSVTPKISIVLRMEHGLKVKVSKRCI 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03792 422 SUPERFAMILY Cytochrome P450 3 420 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03792 422 Pfam Cytochrome P450 8 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03792 422 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 361 370 IPR017972 GO:0005506|GO:0016705
Vifa3g03792 422 PRINTS E-class P450 group I signature 358 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03792 422 PRINTS E-class P450 group I signature 211 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03792 422 PRINTS E-class P450 group I signature 231 257 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03792 422 PRINTS E-class P450 group I signature 279 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03792 422 PRINTS E-class P450 group I signature 368 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03792 422 CDD CYP86A 2 413 - -
Vifa3g03792 422 PANTHER CYTOCHROME P450 2 415 - -
Vifa3g03792 422 Gene3D Cytochrome P450 1 421 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03792 422 PRINTS P450 superfamily signature 280 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03792 422 PRINTS P450 superfamily signature 359 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03792 422 PRINTS P450 superfamily signature 222 239 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03792 422 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03792 Vifa-Chr3 1111163869 1111165137 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03792 2 420 Cytochrome P450 AT2G23180 44.755 4.08e-130 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03792 - - cam:101494575 584.334