Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03791 ATGAAGGAAGACTTAGAAAGGGAGGAGATCGTTCAGAATGAGAAGTGTGTTAGAGACACTGCAGTCAATCTCTTGGGTGCAAGAAATGGAACAATCAGTTCAAGTTTGAGTTGGTTCTTTTGGCTTGTTTCAAATCATCCTAATATGGAAGCTAAAATCATTCAAGAGATCAAAGATAATTGTGAAAACCAAGAGGAGGATTTCATCACTAACTTAAGTTTTGAAAAACTTGATAAGCTTGTGTACCTTCATGGGGCTATAAGTGAAGCCTTAAGGCTTTATCCACCGTACCATTTGAGCACAAGTCCAAGAAGTTGTTTGAGAAAAGATATTAGCTTTCTTCAAATGAAAATGGTTACTACTGCTATCTTATGGAAGTTTGAAGTACATGTGGTGGAAGGTCATTCTATAACTCCAAGGATTTTTATTGTTCTTCGCATGGATCGCGGCTTTAAGGTCAAACTCACAAAAAGAATCATTTGA 483 0.3685 MKEDLEREEIVQNEKCVRDTAVNLLGARNGTISSSLSWFFWLVSNHPNMEAKIIQEIKDNCENQEEDFITNLSFEKLDKLVYLHGAISEALRLYPPYHLSTSPRSCLRKDISFLQMKMVTTAILWKFEVHVVEGHSITPRIFIVLRMDRGFKVKLTKRII 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03791 160 SUPERFAMILY Cytochrome P450 11 158 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03791 160 Gene3D Cytochrome P450 1 100 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03791 160 PANTHER CYTOCHROME P450 12 99 - -
Vifa3g03791 160 Pfam Cytochrome P450 16 100 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03791 160 Gene3D Cytochrome P450 101 159 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03791 Vifa-Chr3 1110585944 1110586626 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03791 6 150 Cytochrome P450 AT2G44890 26.601 3.34e-19 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03791 - - cam:101494575 124.02