Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03789 ATGCACATGATTGAATGCATTGGAGGATTTGTAGCTATCCTAGTCTTCCTATTCATTCACTTTTGGAGACGCAACAGAGATGAAATTTTACTAAATTGGCCAATAATTGGTATGCTACCGGTGCTTTTGCGTCACATGTCCGATTTGCATGATCATATAACCTTAGTGATGAACATCCATGGAGGAACTTTTCGATTTCAAGGGCCTTGGTTCACAGACACAAGCTTTATCGTTACCGCTGATCCAATCAACGTTCAGCATATCACATGCAAGAATTTTGGCAACTACGGGAAAGGGTACAACTTTCAAGAAATTTTTTACTTTTTTGGAGACAGTATTTTAACTGTCAATTCTCATGTTTGGAAACAGGAGAGAATAATGGTTCAGTCAATTCTGAAACGTAAAAGCTTCAACAACTTGTTCCAAAAAACCATACAGAATAAGTTGGTGAACTGCCTACTACCATTTCTTAATGATGTATCTAAACTAGGTATCCAGGTGGACTTGCAAGATGTGTTTGGAAGGTTCACATTTGACAACATAATCGTCACTTTATTCGGATTAGATCCGAATTCCCTTCCAATCAAGTTTAGTGAGCTTCGAGATATTTCTTATCTAAAATCTCCTCATGTAATAGAGCAAGTGATTTTTTACAGGCATTTCATTCCGGTTTGTCTATGGAGGGTGCAAAAATGGCTTCGTGTGGGTCCGGAGAACAAGTACAAGGTAGCCTCAGAGAATCTCAACCGATTCTTGTCCGAACGTATTAGTGCATTTTCCAAACGCAAAGATATGGACGAATGTTTTTTCGACATGATGAAAGCACTGACAAAAGAAGAAAATGGAAAGGAGGAAATGAGTGAGAAGTATGTTAGAGACACAGCAGCCACTTTGCTGTTAGCAGGAAATAGTCCAGTTACTTCAGGTCTCAGTTGGTTTTTCTGGCTTGTTTCAAATCATCCTATTGTTGAAGCTAAAATTATTCAAGAGATTAAAGATAGTTATCCAACACAAGAGGAGAATTTGATCACTAGTTTATGTTTGGAAGAGGTTGATAAGCTAGTGTACCTCCATGCAGCTATATGTGAAGCTTTAAGGCTTTATCCTCCAATACCATTTGAGCATATATGTGCAATCAAATCTGATGTGTTACCTAGTGGACAAGATGTTAGTCCAAATACAAAGTTAATTTACTTTATGTATAGTATGGGAAGGATGGAAGAAATATGGGGAGAAGATTGCAAAGAATTTAAGCCGGAGAGATGGATATCACCGAGAGGAAAAATCATACATGTACCGTCATACAAGTTTGTAACATTCAATGCAGGTCCTAGAAGTTGTTTGGGTAAAAATTTAGCGTTCTTTCAAATGAAAATGGTTGCAGCTGCTATGTTATGGATGTTTCAGATACAAGTGGTGGAAGGACACCCTGTAACCCCAAAGCTTTCTATTTCTCTTGGAATGAAACATGGCTTGAAGGTCAAGGTCACTAAAAGATGCATTTCATAA 1509 0.3791 MHMIECIGGFVAILVFLFIHFWRRNRDEILLNWPIIGMLPVLLRHMSDLHDHITLVMNIHGGTFRFQGPWFTDTSFIVTADPINVQHITCKNFGNYGKGYNFQEIFYFFGDSILTVNSHVWKQERIMVQSILKRKSFNNLFQKTIQNKLVNCLLPFLNDVSKLGIQVDLQDVFGRFTFDNIIVTLFGLDPNSLPIKFSELRDISYLKSPHVIEQVIFYRHFIPVCLWRVQKWLRVGPENKYKVASENLNRFLSERISAFSKRKDMDECFFDMMKALTKEENGKEEMSEKYVRDTAATLLLAGNSPVTSGLSWFFWLVSNHPIVEAKIIQEIKDSYPTQEENLITSLCLEEVDKLVYLHAAICEALRLYPPIPFEHICAIKSDVLPSGQDVSPNTKLIYFMYSMGRMEEIWGEDCKEFKPERWISPRGKIIHVPSYKFVTFNAGPRSCLGKNLAFFQMKMVAAAMLWMFQIQVVEGHPVTPKLSISLGMKHGLKVKVTKRCIS 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03789 502 SUPERFAMILY Cytochrome P450 32 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03789 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Vifa3g03789 502 PANTHER CYTOCHROME P450 22 494 - -
Vifa3g03789 502 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03789 502 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03789 502 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03789 502 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03789 502 Gene3D Cytochrome P450 18 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03789 502 CDD CYP86A 64 492 - -
Vifa3g03789 502 Pfam Cytochrome P450 32 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03789 502 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03789 502 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03789 502 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03789 502 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03789 Vifa-Chr3 1109507465 1109508973 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03789 11 500 Cytochrome P450 AT4G39500 41.535 1.52e-141 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03789 - - gmx:100791312 585.874