Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03783 ATGTCAGAATCAAACGCCATAGCAAATGGCTTAGCTGGTGCTGGTGGTGGAATCATTGCTCAAATCATAACTTATCCACTTCAAGCTGTAAATACACGGCAACAAACTGAGAGAACGTTGCTCAAGAAGAATAAGCAAGGCTTGGTTCCTCAATCTTCTTCCAATGGAATAGCTACTGCTTCTTCTTCTGGGGTTTTTCTTCAAATCTTTCAGGTTATGGGAAATGAAGGTTGGGGTGGACTTTATAGTGGTCTAAAACCTTCTCTTCTTGGAACTGCTGCTTCTCAGGGAATTTACTACTTCTTCTATCAAATCTTCAAGAACAAGGCTGTGGCTATTGCAGCTGCAAGGAAAGTCAAAGGGCATGGAGATGGAACTGTTGGAATGTCTGGTTGGCTCATTGTGGCCGCTATTGCTGGATCCTTGAATGTTTTGTTCACAAACCCAATATGGGTTCTAGTGACTCGTATGCAGACACATATGCAAGCAGAAAGAAAAATCATGGACGAAAAGAAAGAAGCTTTAAGGAAGGCTGCTTCCGAAAGTAACTTATCAGGTTCGACTTTGGAAGACAAATTAGCAGACCTGAATTCTTCAAAACCCCGACCATTTGGGACTGTACATGCAGCTAATGAAGTTTATAATGAAGCCGGTATAGTTGGATTTTGGAAGGGTGTCATCCCTGCTCTAATTATGGTATGCAATCCATCCATCCAGTTTATGATTTATGAGAGTTCATTAAAGCATCTAAGGGAGAAACGTTCTGCTAAGAAGCAAGGGGATACAACTATAACTGCTTTGGAGGTCTTTTTGGTGGGAGCAATAGCGAAACTCGGAGCTACTGTCGCAACATATCCGTTGCAAGTTGTTAAGTCAAGGCTTCAAGCAAAGCAAGAGATTGGTGGAAATAACTCATTAAGATACTCAGGTACATTTGATGCAATTTTTAAAATGATCCGGTATGAAGGTTTTCGAGGATTTTATAAGGGAATGAGTACAAAGATAGTACAAAGTGTTTTTGCTGCTTCTGTATTGTTCATGATAAAAGAGGAACTTGTTAAGGCTATCATGGTTCTGGCAAATAAGAGAAAAAAAGTTGTATTAAAATATGAGTAG 1116 0.3996 MSESNAIANGLAGAGGGIIAQIITYPLQAVNTRQQTERTLLKKNKQGLVPQSSSNGIATASSSGVFLQIFQVMGNEGWGGLYSGLKPSLLGTAASQGIYYFFYQIFKNKAVAIAAARKVKGHGDGTVGMSGWLIVAAIAGSLNVLFTNPIWVLVTRMQTHMQAERKIMDEKKEALRKAASESNLSGSTLEDKLADLNSSKPRPFGTVHAANEVYNEAGIVGFWKGVIPALIMVCNPSIQFMIYESSLKHLREKRSAKKQGDTTITALEVFLVGAIAKLGATVATYPLQVVKSRLQAKQEIGGNNSLRYSGTFDAIFKMIRYEGFRGFYKGMSTKIVQSVFAASVLFMIKEELVKAIMVLANKRKKVVLKYE 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03783 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 264 355 IPR018108 -
Vifa3g03783 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 249 IPR018108 -
Vifa3g03783 371 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 5 360 IPR044712 GO:0006862|GO:0055085
Vifa3g03783 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 109 IPR018108 -
Vifa3g03783 371 SUPERFAMILY Mitochondrial carrier 5 351 IPR023395 -
Vifa3g03783 371 Gene3D Mitochondrial carrier domain 193 369 IPR023395 -
Vifa3g03783 371 Pfam Mitochondrial carrier protein 264 356 IPR018108 -
Vifa3g03783 371 Pfam Mitochondrial carrier protein 131 252 IPR018108 -
Vifa3g03783 371 Pfam Mitochondrial carrier protein 4 108 IPR018108 -
Vifa3g03783 371 Coils Coil 161 181 - -
Vifa3g03783 371 Gene3D Mitochondrial carrier domain 1 186 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03783 Vifa-Chr3 1107307537 1107311671 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03783 26 356 Chloroplast and Mitochondria Gene Families AT2G47490 28.614 4.78e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03783 K13354 - gmx:100777898 574.704