Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03761 ATGGAAGCACTCAACTGCATACTCCTCTTTCTCCTCACCTTCATCTTCCTCAAATTCCTCCATTCTCTCCTCACAAAACAACACAACCTCCCCCCAGGTCCTCGAGGTCTTCCCATCATTGGCAACCTCCATCAACTAGGCCAAAAGCCTCACCAAACCCTAACCACACTCTCCAAAACCCACGGTCCGATAATGACCCTAAAACTAGGCCAAATAACCACCATAGTTATGTCCTCATCACAAACTGCTAAATCAGTTCTTCAAATCAATGACCAATATCTCTCTAACAGAACTGTCCCTGATGCAATGAGAGGCTCTAACCACCATAACTACAGTTTACCATTCATCCCTCTATCTCAACGCTGGAAAGACCTCAGAAAAATCTGCAACAACTTACTATTCTCGAACAAAAACCTCGACTCGAATCAAGCACTCAGACACAAGAAGCTTCTAGAACTTTCAAACGATATATACGAAAGTGCTGCAAAATTTGAAGCTGTTAATATCGGAAGACTAGCTTTTAAAACAACCATAAACATGTTGTCCAATACAGTTTATTCAGTTAATTTGGTTCCTTCGAGTGACAAAGCCGGTGAGTTTAAGGAGTTGGTTACAAATATTATGAAGGAAGTTGGAAGAGCAAACGTTGCTGATTGTTTTCCTGTGTTGAAGATTTTGGATCCTGTTGGTATTAGAAGAAGAACTGGCGAATATTTTGGGAAGTTGTTGGATTATTTTAGAAAGTTGGTTGATGAAAGGTTGAAGATGAGAGAGTTGAAGAGCTATTGTGGTAAAAGTGATATGTTAGATACTATGCTTAATGATGAAAATAACAATGGTGAAATGTATGAAGATAAGATTGAACGTTTATCAGTGGACTTGTTTGTGGCAGGAACTGACACGGTGACTTCAACCGTAGAATGGGCAATGGCTGAATTACTTCACAACCCAAACATTATGTCAAAAGCAAAATCAGAGTTAAACCAGCTAATTGGCAAAGGAAACTTGGTCAAGGAATCAGACATAGCAAAACTCCCTTACTTACAAGCAATAGTAAAAGAAACTTTTAGATTACACCCAGCAGTTCCATTTTTACTACCAAGAAAAGCTGAAATGGATTTAGAGATAAATGGCTATAAAGTCCCAAAAGGTGCAAAAGTGTTGGTGAATGTTTGGGCTATTGGGAGGGACCCAAATTTATGGGACAATCCAAATGAGTTTTTGCCTGAGAGATTTTTGGGGTCAGATATTGATTTTAAAGGTAGGAATTTTGAGTTGACACCTTTTGGTGGTGGGAGAAGAATTTGTCCTGGTTTACCTTTGGCTATAAGAGTGCTGTTTTTGATGTTGGGTTTGTTTATTAATTGTTTTGAGTGGGAGCTTGATGGTGGAATCAAAGCTGAGGATATGAATATGGATGATAAATTTGGACTTACTTTGGAGAAAGCTCAACCTTTGCTAGCTATTCCAATTAAAGGCAGGCAATGA 1488 0.3898 MEALNCILLFLLTFIFLKFLHSLLTKQHNLPPGPRGLPIIGNLHQLGQKPHQTLTTLSKTHGPIMTLKLGQITTIVMSSSQTAKSVLQINDQYLSNRTVPDAMRGSNHHNYSLPFIPLSQRWKDLRKICNNLLFSNKNLDSNQALRHKKLLELSNDIYESAAKFEAVNIGRLAFKTTINMLSNTVYSVNLVPSSDKAGEFKELVTNIMKEVGRANVADCFPVLKILDPVGIRRRTGEYFGKLLDYFRKLVDERLKMRELKSYCGKSDMLDTMLNDENNNGEMYEDKIERLSVDLFVAGTDTVTSTVEWAMAELLHNPNIMSKAKSELNQLIGKGNLVKESDIAKLPYLQAIVKETFRLHPAVPFLLPRKAEMDLEINGYKVPKGAKVLVNVWAIGRDPNLWDNPNEFLPERFLGSDIDFKGRNFELTPFGGGRRICPGLPLAIRVLFLMLGLFINCFEWELDGGIKAEDMNMDDKFGLTLEKAQPLLAIPIKGRQ 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03761 495 SUPERFAMILY Cytochrome P450 31 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03761 495 FunFam Cytochrome P450 76C4 23 489 - -
Vifa3g03761 495 CDD CYP76-like 58 490 - -
Vifa3g03761 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Vifa3g03761 495 Pfam Cytochrome P450 31 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03761 495 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03761 495 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03761 495 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03761 495 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03761 495 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03761 495 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03761 495 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03761 495 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 8 492 - -
Vifa3g03761 495 Coils Coil 273 293 - -
Vifa3g03761 495 Gene3D Cytochrome P450 17 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03761 495 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03761 495 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03761 495 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03761 495 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03761 Vifa-Chr3 1101323035 1101325124 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03761 8 492 Cytochrome P450 AT2G45550 45.984 2.39e-161 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03761 - - lja:Lj2g3v0039250.1 652.129