Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03759 ATGACTTCTTCCATCAAAATCTCTAGGCTCATTTCTCGCTCAATTTCTTCTGCATCTTCTTCTACCTTGTTCTCTCGAGGTGGGAATGGCGGTTATCAGGGTGTATTACTTGCTAAATATAGCACAGCTGTTGTTGTTGATGAACAGCCGATTAAACCGTTGGTGCAAGTAGAGCATACTGGGCTCTTAATTGATGGAAAGTTTGTTGATGATGCTTCTGGGAAAATATTTCCAACATTGGATCCGAGGACCGGGGAAGTGATTGCTCATGTTGCGGAGGGTCACTCTGAAGATATTGATAGGGCTGTTGCAGCTGCACGCAAAGCATTTGATATAGGCCCGTGGCCTAAGATGACAGCCTATGAAAGGCAAAAGATAATGTTGCGTGCTACTGATCTGATTGAGAAACATAACGATGAGATTGCGACACTTGAGACATGGGATAATGGGAAGCCGTATGAACAATCTCGTCAAGTTGAAATTCCAATGTTGGTTCGCCTAATTCGATACTATGCTGGTTGGGCAGATAAGATTCATGGTCTCACAGTTCCAGCTGACGGAGCCTATCATGTGCAGACATTGCATGAACCGATTGGTGTTGCTGGTCAGATCATTCCATGGAACTTCCCTCTTCTCATGTTTGCTTGGAAGGTCGGTCCGGCGTTAGCATGTGGCAACACTGTCGTTATGAAAACAGCCGAGCAGACACCACTGTCTGCGTTTGTTGGATCCTAA 735 0.4531 MTSSIKISRLISRSISSASSSTLFSRGGNGGYQGVLLAKYSTAVVVDEQPIKPLVQVEHTGLLIDGKFVDDASGKIFPTLDPRTGEVIAHVAEGHSEDIDRAVAAARKAFDIGPWPKMTAYERQKIMLRATDLIEKHNDEIATLETWDNGKPYEQSRQVEIPMLVRLIRYYAGWADKIHGLTVPADGAYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVMKTAEQTPLSAFVGS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03759 244 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 52 242 IPR016162 GO:0016491
Vifa3g03759 244 FunFam Aldehyde dehydrogenase, mitochondrial 50 244 - -
Vifa3g03759 244 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 48 241 - -
Vifa3g03759 244 SUPERFAMILY ALDH-like 54 241 IPR016161 GO:0016491
Vifa3g03759 244 Pfam Aldehyde dehydrogenase family 68 241 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03759 Vifa-Chr3 1101060544 1101061278 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03759 6 241 Aldehyde Dehydrogenase Gene Family AT3G48000 71.186 1.08e-124 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03759 K00128 - gmx:100777399 390.963