Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03752 ATGCAAATTTTCACATCACTTCTTAATTCTTGTTTAAATTCTTCTCTCTACTTCATTATATTTCTCCTCTTTTTCTCTTCTTTTTCTCTTCTCCTTCAATGGTGGAAACACCATAGACATAAAGACAAACATTTACCCCCTGGTTCAATGGGTTGGCCTTACTTTGGAGAGACCCTCAAACTCTACACACAAAATCCAAATTCATTCTTTTCCTCAAGGCAGAAAAGGTATGGAGACATATTCAAGACACACATACTAGGTTGTCCTTGTGTGATGATATCTAGTCCTGAGGCAGCAAGAGCAGTGCTTGTGACTCAAGCACATCTTTTTAAACCAACATACCCTCCAAGCAAAGAGAAGATGATAGGACCAGAAGCTTTGTTCTTTCAACAAGGTGCTTATCACTCCATGCTCAAGAAGATGGTTCAAGCCTCTTTTTTACCTTCTACAATTAAAAACTCTGTCCCTTTTGTGGACCAAATTGTACAAAACATGGTCCCATCTTGGACTAATACAACCATCAACACATTGGAAGAGATGAAAAAGTATGCTTTTGAAGTGGCTGCAAATTCAGCTTTTGGTGAAATAAAGGAAATGGAAATGGAAGAAATAAGAGAGTTGTATCATTGCTTAGAGAAAGGCTACAATTCTCATCCTTTAAATCTTCCCGGAACTTTCTATTGGAAGGCAATCAAGGCAAGGAAGGTTTTGAATGAGATTATAAGGAAGATAATCGAAAGAAGGAAGGAGAGTAGAAACTATGGAGGAGGGTTGTTGGGAGTTCTATTGAGAGGAGGCAGAGGTGATCAACAACAACAACAATTGACTGACTCTCAGGTTGCTGACAATCTCATTGGTGTGATCTTTGCTGCACATGATACCACAGCCAGTGTTCTAACATGGGTTCTTAAGTACTTGCATGACAATCTCAATCTCTTAGAAACCGTCACGAAAGAACATGAAAGAATAAGAAACAAACTTGTTAATGAAAACCGCGGTCTTTCATGGGAGGATACAAGGCAAATGCCATTTTCTACCAAGGTGATCCAAGAGACATTAAGGAGTGCAAGTATATTATCATTTACATTTAGAGAAGCAGTACAAGATGTGGAACTTGAAGGTTACGCTATTCCAAAAGGTTGGAAAGTGCTTCCACTGTTTAGATCCATTCATCATTCACCTCATTTCTTCCCTCAACCACACAAGTTTGACCCTTCAAGATTCGAGGTTCCACCTAGGCCAAACACATATATGCCATTTGGAAGTGGAGTCCACTCTTGTCCAGGTAGTGAGCTTGCTAAGCTTGAGGTTCTTGTTCTTCTTCATCATCTCACCCTTAAATACAGGTGGGAAGTTGTTGGAGATGGAGATGGAATTCAATACGGTCCTTTTCCTGTGCCAAAAAACGGATTGCCACTAAAGATTACTCTAAACAAGAGATAG 1443 0.395 MQIFTSLLNSCLNSSLYFIIFLLFFSSFSLLLQWWKHHRHKDKHLPPGSMGWPYFGETLKLYTQNPNSFFSSRQKRYGDIFKTHILGCPCVMISSPEAARAVLVTQAHLFKPTYPPSKEKMIGPEALFFQQGAYHSMLKKMVQASFLPSTIKNSVPFVDQIVQNMVPSWTNTTINTLEEMKKYAFEVAANSAFGEIKEMEMEEIRELYHCLEKGYNSHPLNLPGTFYWKAIKARKVLNEIIRKIIERRKESRNYGGGLLGVLLRGGRGDQQQQQLTDSQVADNLIGVIFAAHDTTASVLTWVLKYLHDNLNLLETVTKEHERIRNKLVNENRGLSWEDTRQMPFSTKVIQETLRSASILSFTFREAVQDVELEGYAIPKGWKVLPLFRSIHHSPHFFPQPHKFDPSRFEVPPRPNTYMPFGSGVHSCPGSELAKLEVLVLLHHLTLKYRWEVVGDGDGIQYGPFPVPKNGLPLKITLNKR 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03752 480 Pfam Cytochrome P450 46 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03752 480 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03752 480 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03752 480 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03752 480 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03752 480 SUPERFAMILY Cytochrome P450 38 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03752 480 FunFam Abscisic acid 8 35 477 - -
Vifa3g03752 480 Gene3D Cytochrome P450 36 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03752 480 PANTHER CYTOCHROME P450 26 43 467 - -
Vifa3g03752 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Vifa3g03752 480 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03752 480 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03752 480 PRINTS E-class P450 group I signature 299 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03752 480 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03752 480 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03752 480 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03752 480 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03752 Vifa-Chr3 1098805738 1098808720 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03752 36 472 Cytochrome P450 AT3G19270 58.219 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03752 K09843 - gmx:100782541 719.153