Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03743 ATGTTGTTTAATTTCCATGAACAGTGGAAGCCAGTTTTGGTTATGATTATAGTGAATTTAGCTTTATCCGTTGTCAATGTATTATTGAAGAAGATTCTTAATGAAGGAATGGATCATTTAACCATTTTAACATATCGACAAGCAATTGCATCAATTTTCTTGGCACCTATTGCTTGCATATTTGAAAGGGAAAGCAAGATTGATGGCCATATAATATGTCTCCTTTTCTTTAGTGCTCTTGTAGGAGTGACACTCACACAATACCTCTTTCTTATGGGACTTGAATATACATCAGCAACTTTCTCATGTGGATTTCTCAATACAGTGCCTGTATTCACATTCATTATGGCTCTTCCTTTGGGGATGGAGAAAGTGAGCATGAAAAGCAAGAGTTCAAAAGCCAAAATCTTGGGAACTTTTGTGTGTATTGGTGGAGCTTTGTTATTGATTCTTTACAAAGGAGTACCCTTAATCAACTCACAATCTCATCATCCCATAGCTGAGAAAGTCACAACAACAGGATCAACCTCTAATTTAAAGAAATGGATTATAGGTTCAATATTTCTACTTGCAACTTGCCTCTTCTGGTCTTCATGGTTTCTTATACAAGAAAGGGTTGGCAAAAATTATCCATACCAATACTCTAGCACAGCCATTTTGTCATTCTTTGCTTCCATTCAATCCGCGATATTAAACTTGATCATACATAGAAACAATGCCAAATGGATTCTCAAAGGAAAGCTTCAGATAATGAGTATTTTATATTCTGGGTTGGTGGGATCAGGCTTATGCTATGTGGCAATGGCATGGTGTGTCAAACAAAAGGGTCCAGTATTCACTGCAGCATTTACACCACTTTTGCAAATGTTTGTGGCTGTGCTTGATCTATGTATTTTACAAGAGGAAATTTATCTAGGAAGTGTTGTAGGATCAATCTTTGTTATTTCTGGCATGTATATGCTCTTATGGGGTAAAAGTAAAGAGAGAGAACAGTGTAGCTTGAAGAACATTCAAGAAAATCAAAAGGATGAAGAATGTCACTAA 1044 0.3611 MLFNFHEQWKPVLVMIIVNLALSVVNVLLKKILNEGMDHLTILTYRQAIASIFLAPIACIFERESKIDGHIICLLFFSALVGVTLTQYLFLMGLEYTSATFSCGFLNTVPVFTFIMALPLGMEKVSMKSKSSKAKILGTFVCIGGALLLILYKGVPLINSQSHHPIAEKVTTTGSTSNLKKWIIGSIFLLATCLFWSSWFLIQERVGKNYPYQYSSTAILSFFASIQSAILNLIIHRNNAKWILKGKLQIMSILYSGLVGSGLCYVAMAWCVKQKGPVFTAAFTPLLQMFVAVLDLCILQEEIYLGSVVGSIFVISGMYMLLWGKSKEREQCSLKNIQENQKDEECH 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03743 347 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 328 - -
Vifa3g03743 347 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020
Vifa3g03743 347 Pfam EamA-like transporter family 11 150 IPR000620 GO:0016020
Vifa3g03743 347 PANTHER WAT1-RELATED PROTEIN 10 335 IPR030184 GO:0016020|GO:0022857
Vifa3g03743 347 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03743 Vifa-Chr3 1096824382 1096825932 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03743 9 256 Nodulin-like Gene Family AT3G30340 49.004 6.79e-81 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03743 - - gmx:100794199 518.079