Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03740 ATGAGCCCGCCTTGCCCTCCTTTTGAGTGTGCACATATGTGGGGACCCTCGCTCGTCTCATCTTTGAAGGACTCTTCACTTCACAGTTCTCCGAGGCAACCTGCTTTTGACCTTATACAGACAATCATAGTATCAGATGCTACTGCTTTAATATATTCAGTGCTGAATTGCTGCGTAACTCATGGCGAAGAGCAGGATTGTAATAGTTCTTGGAATGAATTCAATGCGCAGAGTGGTATAGCCTCTCAGGAGTGCCGAGATTGGATGTGCATTCCAATGTTATGGGTTAATGTTTTAGTTGATACCAGTCCCTCAATTCTCCCACTTTCATTTTCCAAAGCTGTTTTTTGGGCACGATCTCGTTTTCCGATGGTAGAGCTTGAAAGTAGTGCTGAAATGATGCCTCCAGTCAGATCTTGCCTTTCATCTTTTGTTGCAGAATTATCATTTTCATTTGGGTGGAAAGTTCCAACTGGATCTAATGATGGCGGTGATGGAAACAAAACTAAGAACTCAGTTGAAGTGTTGACTATGTCTTTTCCTTTAATAAGAACATTTAACAGGTTCACTACACATTTTCTGGTTCATATGAGACAAGGAGAACTTCGAAGTCAGTGGATTTGGGAACCACTAATGAGTCAAAGCTTGATCCTTTCATTATTGGATCCAAATGATGATGTTAGACAGTTTGGAAAGTCTATGTTGGAACAAGTTTCAGATACTCATGGTCTTTCTTGTGGTTTGAAGTTTCTTTGTTCTCACAGACCCTCGTTGCATGCAACTCTTTTGGGACTAAAACATGCTATGAAACTGGTCCAACTGGATTCTGTTCTGTTGAAGTTTCATACTTTACATCATTTTTGGTTTCTTTTATGCAAATTACTCAAAGATGAGGGTTTACTTGGCCCAGAGTTGGTCGGAAATAGACACGGTGACTCAAGTCTGCCAAAGTTCTCTTCACAAGGCGGGTTTTTGAAACAGCCAACTTTTGATTCTCTGCCTGTGGATATTGATAAACATGTTATCAACGTTGAGCTAAAAATAAAGGAAACATTTAGTCGCTTACTATCTGAAATGGCATGGCCTGTTTTCTGTAGGTGCCTGGTAAAAGGCAAGGAATTCATTAATTACAATTTCTGCCAGATGACTTGTGTTCGGTTGCTCGAGATTCTCCCTGTTCTTGTTGATAAACTCTGCCTATTTGGTAGAGAAGAGCTTAGAAATTTCACAATGCTGGTCAAAAATAAATTGGGTGTCAAATGGATTCACAATCTCATGGAATGGGGAAAGTCCATGCTAAAAGTTGTAATTATTTATTGGAAACGAGCACTTACTTATTTACTGAATCTGTTCAAAGGTTCTAGTAATAAAACTTTTGCATCAGCAATCATGATCATTGAAAATCTTATTACGAGCAATGGTTTTACTTTGGAAGAATTGTCAGAACATGTCTCTCGCCCGACCATGTCTCTATCTAGTGAAGACTCTCATAATTTTCAGGAGGAAAATGCGAAGTTCAATGATGAGTGGCAAAAAAATACGGAAACTATAGTTATTCTTTCAGATGATGAATTTGAACCAAACGTGTTTTCTAATGCCATTTTATCAGTTAGTGAGACAGGTCAAAACATATCTGATGGCAACTTAAAGCCTCATACTGCTGGTAATAGTTCACTAGCATCTGACCGTGCAATCCAGAATGTTGCTTACATGAAATCTTCTAAGGAAATAAAGGAGGCCTTCCAGAAGAAGGATACTGCTGAAGCTTTCAGTCTTTCTTCTCAGAAACAAGACTCTGGTAATTTATGCAATAAGCTTGCAGTTGCTCCATATGTTGATTCAAAGTGCCCAGAGAGTTGTAAGAGGGAAGGAATTTCCAAATCCAAGGATAGGGTCAATTCGATAAAATATTTTGTTGAAACTGTTAGTACTAAGAGTTTGAATAGAACAGGCAGTAATATAGCTTCCAAAATTAGTGACACTCTGCCATGTCCTAGTAACGAAGTTTTAAGTGACCTTCGGGATTCTGAAGATGACCCGCTAGAAACTGCATTGAAATCTGTGGGGCGTACCCAGTTGTATGTACCAAAGCCCACTTCAATTTTGAAAAGGCAAGTTACTCAACTAAAAGCTACTCTTGAAAACAGATCCGATAGTCTTCATAAGGCAGGGGACCAAACGAGAAGATTCAAGCCACCAAGTTTGGATGATTGGTATAAACCTATTCTTGAAATAGATTATTTTGCAATAGTTGGTTTGTCATCTGCAAGAAAAGATGAAAGCCGAGTTGTTAACAGATTAAAGGAAGTTCCTGTATGTTTTCAATCAGCTGAGCAATATGTGGAAATGTTTCAACCATTAGTTTTGGAGGAGTTTAAAGCACAACTTCAAAATTCTTTTCTTGAGATGTCTTCATGGGAGGAGATGTTTTATGGAAGCCTTTCTCTTCAAGCCCAGGCCCAAGCTCATGCAGCAGCAGCCAGTGGTCTTCTTGGCCATACAGAACTACGATTGCATATGCCTCCATCGATAACACTTGCAAGCCGAGGGCGTCTGCAGGGTCTCAGACTTCAGCTGACACTTCTTGATCGGGAGTTTGATGATCTAGATTAA 2613 0.3957 MSPPCPPFECAHMWGPSLVSSLKDSSLHSSPRQPAFDLIQTIIVSDATALIYSVLNCCVTHGEEQDCNSSWNEFNAQSGIASQECRDWMCIPMLWVNVLVDTSPSILPLSFSKAVFWARSRFPMVELESSAEMMPPVRSCLSSFVAELSFSFGWKVPTGSNDGGDGNKTKNSVEVLTMSFPLIRTFNRFTTHFLVHMRQGELRSQWIWEPLMSQSLILSLLDPNDDVRQFGKSMLEQVSDTHGLSCGLKFLCSHRPSLHATLLGLKHAMKLVQLDSVLLKFHTLHHFWFLLCKLLKDEGLLGPELVGNRHGDSSLPKFSSQGGFLKQPTFDSLPVDIDKHVINVELKIKETFSRLLSEMAWPVFCRCLVKGKEFINYNFCQMTCVRLLEILPVLVDKLCLFGREELRNFTMLVKNKLGVKWIHNLMEWGKSMLKVVIIYWKRALTYLLNLFKGSSNKTFASAIMIIENLITSNGFTLEELSEHVSRPTMSLSSEDSHNFQEENAKFNDEWQKNTETIVILSDDEFEPNVFSNAILSVSETGQNISDGNLKPHTAGNSSLASDRAIQNVAYMKSSKEIKEAFQKKDTAEAFSLSSQKQDSGNLCNKLAVAPYVDSKCPESCKREGISKSKDRVNSIKYFVETVSTKSLNRTGSNIASKISDTLPCPSNEVLSDLRDSEDDPLETALKSVGRTQLYVPKPTSILKRQVTQLKATLENRSDSLHKAGDQTRRFKPPSLDDWYKPILEIDYFAIVGLSSARKDESRVVNRLKEVPVCFQSAEQYVEMFQPLVLEEFKAQLQNSFLEMSSWEEMFYGSLSLQAQAQAHAAAASGLLGHTELRLHMPPSITLASRGRLQGLRLQLTLLDREFDDLD 870
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03740 Vifa-Chr3 1096325493 1096328354 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03740 828 870 C3H Transcription Factor Family AT3G55530 86.047 6.01e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03740 - - gmx:102663671 1069.68