Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03734 ATGGCTTCAGCATCTCTCCAGGTTGGATTCTATGGCTACACATGTCCATCTGCTGAGACAATCGTGAGAAATTCGGTTAACAAAGCTGTTTCACAAAACCCTGGCTTAGGTGCTGGATTGATCAGAATGCATTTTCATGATTGCTTTGTGAGGGGTTGTGATGCTTCTGTGTTACTAGCATCAACTCCAGGAAATATAGCTGAGAGAGACAACTTTATCAACAATCCAAGCCTACGCGGCTTCGAGTTTATCAACGAGATCAAGGCCCAACTAGAATCTGAATGTCCGCAAACAGTATCGTGTGCGGACATTCTTACCTTGGCAACACGAGACAGTGTTGTCAAGCTCAGTGGTGGTACTATAAACTACGACGTACCATCAGGGCGAAGAGACGGCCGTGTCTCTATCGGAGACGAAGTGCCAAAAAATCTACCCGCACCTTTCTTCAACGCCGATCAACTCATCGCAAACTTTGCACAGAAAGGGTTATCAGCTGATGAAATGGTTACACTCTCGGGAGCACATTCAATTGGTGTGTCACATTGTTCTTCATTCTCTAACCGTTTGTATTCATTTAGTAATACAAATGCTGTAGATCCTTCCATGGATCCATCCTTTGTTGAATCATTGAAAACAAAGTGTCCAGTACCTCCAAGTAGCAACGATCCATTAGTGGTGCTTGATGTTGGTACTCCTAATCGTTTGGATAGTGTGTACTATGAGGGATTGGTTAACCATCGTGGTTTGTTGACTTCAGATCAAACATTGTTGAGTGGTCAATCAACACAAGGAATTGTGGTAAATAATGCTAATTATGGTGCAAGTTGGGCTAAGAAGTTTGCAGATGCTATGGTTCATATGGGTTCTATTGATGTGTTAAGTGGCTATGATGGTGAGATTAGGAAACATTGCAACTTTGTCAATTAA 927 0.425 MASASLQVGFYGYTCPSAETIVRNSVNKAVSQNPGLGAGLIRMHFHDCFVRGCDASVLLASTPGNIAERDNFINNPSLRGFEFINEIKAQLESECPQTVSCADILTLATRDSVVKLSGGTINYDVPSGRRDGRVSIGDEVPKNLPAPFFNADQLIANFAQKGLSADEMVTLSGAHSIGVSHCSSFSNRLYSFSNTNAVDPSMDPSFVESLKTKCPVPPSSNDPLVVLDVGTPNRLDSVYYEGLVNHRGLLTSDQTLLSGQSTQGIVVNNANYGASWAKKFADAMVHMGSIDVLSGYDGEIRKHCNFVN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03734 308 PRINTS Plant peroxidase signature 15 34 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g03734 308 PRINTS Plant peroxidase signature 242 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g03734 308 PRINTS Plant peroxidase signature 39 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g03734 308 PRINTS Plant peroxidase signature 79 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g03734 308 PRINTS Plant peroxidase signature 98 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g03734 308 PRINTS Plant peroxidase signature 166 178 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g03734 308 PRINTS Plant peroxidase signature 226 241 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g03734 308 PRINTS Plant peroxidase signature 282 295 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g03734 308 SUPERFAMILY Heme-dependent peroxidases 6 308 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa3g03734 308 CDD secretory_peroxidase 6 307 IPR033905 GO:0004601|GO:0042744
Vifa3g03734 308 Pfam Peroxidase 22 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g03734 308 Gene3D Peroxidase, domain 2 145 287 - -
Vifa3g03734 308 FunFam Peroxidase 9 148 - -
Vifa3g03734 308 Gene3D - 9 308 - -
Vifa3g03734 308 PRINTS Haem peroxidase superfamily signature 119 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g03734 308 PRINTS Haem peroxidase superfamily signature 228 243 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g03734 308 PRINTS Haem peroxidase superfamily signature 37 51 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g03734 308 PRINTS Haem peroxidase superfamily signature 167 182 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g03734 308 PRINTS Haem peroxidase superfamily signature 99 116 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g03734 308 ProSitePatterns Peroxidases proximal heme-ligand signature. 167 177 IPR019793 -
Vifa3g03734 308 FunFam Peroxidase 145 287 - -
Vifa3g03734 308 ProSitePatterns Peroxidases active site signature. 37 48 IPR019794 GO:0004601
Vifa3g03734 308 PANTHER PEROXIDASE 25-RELATED 8 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g03734 308 ProSiteProfiles Plant heme peroxidase family profile. 5 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03734 Vifa-Chr3 1095687670 1095688682 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03734 1 308 Peroxidase AT4G11290 46.278 7.26e-93 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03734 K00430 - gmx:100786791 450.284