Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03731 ATGTTAAATGTTTGCATATATGTGCTGAATTCATCTGATGCTCCTGGCCTGGCATCAACAGTTTTGCTTGAAAAGTCTAGAGTTGTTCAATGCAATGAAGGGGAGAGGTCATATCATATATTTTATCAGTTATGTGCTGGTGCACCACCATCTCTTCGGGAGAAGCTCAACCTACGAAATGCAGAAGATTATAAATATTTGAAGCTGAGCAATTGTTATTCAATTACTGGTGTTAACGATGCAGAAGAGTTTCGCATAGTCATGGAAGCTCTTGATGTTGTCCACATCAGTAAAGAAGACCAAGAAACTGTATTTGTTATGCTTGCTGCAGTATTATGGTTAGGGAACATATCATTTACTGTTATTGATAATGAAGACCATGTTCAAGCGGTAGAAAATGAGGGTTTGTTACACGTTGCCGAATTGATTGGCTGTGACCTAGAACATCTCAAGTTGACTCTATCAACTCGCAAAATGAAAGTTGGTAATGATAAGATCGTCCAGAAGTTGACATTATCACAGGCAATTGATGCAAGAGATGCTTTGGCAAAGTCTATATATTCATGCCTTTTTGATTGGTTGGTTGAACAAATAAATAAATCACTTGCTGTTGGCAAAAGACGTACTGGCAGATCAATCAGTATTCTAGATATATACGGCTTTGAATCATTCAACAGAAACAGTTTTGAGCAGTTCTGCATAAATTATGCAAATGAAAGATTGCAGCAACACTTCAATCGTCACTTATTCAAGTTAGAACAGGAGGAATATATTCAAGATGGCATTGATTGGGCTAAAGTTGAATTTGAAGACAATCAAGACTGCCTTAATCTTTTTGAGAAGAGGCCATTGGGGTTATTATCACTGTTAGATGAAGAGTCCACTTTCCCAAATGGCACAGATTTGACATTTGCCGACAAACTTAAACAGCATTTAAATTCCAAATCTTGTTTTAAAGGAGAAAGAGACCAAGCCTTTACTGTGTGTCATTATGCCGGAGAGGTAACTTATGATACAACTGGGTTTCTCGAGAAGAATAGGGACCTATTGCACTTGGATTCCATCCAACTTCTATCCTCATGCACATGTCGTCTTCCTCAAATATTTGCATCTCATATGCTTACACAGTCTGAAAAGCCAGTAAATGGTCCTTTACACAAGTCAGGTGGGGCAGATTCCCAAAAGCTAAGTGTTGCAACAAAATTCAAGGGTCAGTTGTTTCAACTGATGCAACGCTTAGAGAGCACAACTCCACATTTTATTCGCTGCATTAAACCCAACAATCTTCAATCACCAGAATCATATGAGCAGGGGCTTGTACTGCAACAGTTGAGGTGCTGTGGGGTGCTGGAAGTGGTTCGAATATCAAGATCCGGCTTTCCGACAAGAATGTCTCACCAAAGGTTTGCCAGAAGATATGGCTTTCTTCTCCTTGATAGTGCTGCATCTCAGGATCCACTTAGTGTTTCAGTTTCAATTCTTCATCAATTTAATATTTTGCCTGAGATGTATCAAGTTGGCTACACAAAATTATTTTTCCGAACAGGGCAGATTGGTGTGCTTGAAGATACTAGAAATCGTACCCTTAATGGCATCTTACGCATGCAAAGTTGTTTTAGGGGTTACCAAGTTCGTCATTCTCTCAAGAAGCTTCAAGGAGGAATCTCTACTTTGCAGTCATTTATTCGGGGAGAGAAAACAAGAAAGGAATATGCTGCTTTGCTTCAGAGACATAAAGCTGCTGTTATTATACAGAAGCAGATAAAAGCAGTGTTTGTAAGAAACAAAGTTCGGACTGTTAAAGATGCTACAATTGTCATACAATCAGTTATTCGTGGATGGTTGGTCAGAAGATGCTCAGGGGATATTGGATTTTTGAAATATGGGGACATAAAGACAAAAGAATCAGATGAGATTTTGGTCAAGGCATCTTTTCTGGCTGAATTGCAGCGCCGGGTACTTCAGGCTGAAGCTGCCTTGAGAGAGAAAGATGAGGAAAATGACATCCTTAACCAACGTATCCAACAATATGAGAGCAGATGGTCTGAGTATGAGTCGAAGATGCAATCCATGGAAGAAGTGTGGCAGAAACAAATGAGATCCCTTCAATCTAGCCTCTCCATTGCCAAGAAGAGCCTAGCTATAGATGACTCCGAAAGAAACTCAGATGCATCTGTTAATAATGCAAGCGATGAGCGTGACTACAGCTGGGACGGGGGAAGTAATCACAGGCGCCAAGAAAGCAACGGAACAAGATCGACGAGTGCTAGTTTGAGTGTAATAAGCCGGCTTGCTGAAGAATTTGAACAAAGGAGTCAAGTATTTGCGGATGATGCCAAGTTCTTGGTTGAGGTAAAATCTGGTCAAGTAGAAGCAAGTTTGAACCCAGATCAAGAACTTAGAAGGTTAAAACAGATGTTTGAAGCTTGGAAAAGGGATTACACGGCAAGATTGCGTGAAACCAAGTTGATTATAAATAAACTTGGAACTGAAGATGGCGCAATTGAGAAAATGAAGAAAAAGTGGTGGGGAAGAAGGAACAGTACAAGGATAAACTGA 2559 0.3994 MLNVCIYVLNSSDAPGLASTVLLEKSRVVQCNEGERSYHIFYQLCAGAPPSLREKLNLRNAEDYKYLKLSNCYSITGVNDAEEFRIVMEALDVVHISKEDQETVFVMLAAVLWLGNISFTVIDNEDHVQAVENEGLLHVAELIGCDLEHLKLTLSTRKMKVGNDKIVQKLTLSQAIDARDALAKSIYSCLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKRPLGLLSLLDEESTFPNGTDLTFADKLKQHLNSKSCFKGERDQAFTVCHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCTCRLPQIFASHMLTQSEKPVNGPLHKSGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNLQSPESYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQRFARRYGFLLLDSAASQDPLSVSVSILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLNGILRMQSCFRGYQVRHSLKKLQGGISTLQSFIRGEKTRKEYAALLQRHKAAVIIQKQIKAVFVRNKVRTVKDATIVIQSVIRGWLVRRCSGDIGFLKYGDIKTKESDEILVKASFLAELQRRVLQAEAALREKDEENDILNQRIQQYESRWSEYESKMQSMEEVWQKQMRSLQSSLSIAKKSLAIDDSERNSDASVNNASDERDYSWDGGSNHRRQESNGTRSTSASLSVISRLAEEFEQRSQVFADDAKFLVEVKSGQVEASLNPDQELRRLKQMFEAWKRDYTARLRETKLIINKLGTEDGAIEKMKKKWWGRRNSTRIN 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03731 852 Gene3D Kinesin motor domain 19 455 IPR036961 -
Vifa3g03731 852 Gene3D - 36 95 - -
Vifa3g03731 852 SMART MYSc_2a 1 527 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vifa3g03731 852 Gene3D - 459 527 - -
Vifa3g03731 852 MobiDBLite consensus disorder prediction 742 756 - -
Vifa3g03731 852 ProSiteProfiles Myosin motor domain profile. 1 526 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vifa3g03731 852 ProSiteProfiles IQ motif profile. 551 580 IPR000048 GO:0005515
Vifa3g03731 852 Coils Coil 646 694 - -
Vifa3g03731 852 PRINTS Myosin heavy chain signature 265 293 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vifa3g03731 852 PRINTS Myosin heavy chain signature 212 240 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vifa3g03731 852 PANTHER MYOSIN 19 844 - -
Vifa3g03731 852 Pfam Myosin head (motor domain) 19 514 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vifa3g03731 852 ProSiteProfiles IQ motif profile. 530 557 IPR000048 GO:0005515
Vifa3g03731 852 FunFam Myosin heavy chain 36 92 - -
Vifa3g03731 852 Gene3D Myosin VI head, motor domain, U50 subdomain 97 394 - -
Vifa3g03731 852 SMART iq_5 576 598 IPR000048 GO:0005515
Vifa3g03731 852 SMART iq_5 599 621 IPR000048 GO:0005515
Vifa3g03731 852 SMART iq_5 527 549 IPR000048 GO:0005515
Vifa3g03731 852 SMART iq_5 550 572 IPR000048 GO:0005515
Vifa3g03731 852 FunFam Unconventional myosin-XIX 224 416 - -
Vifa3g03731 852 MobiDBLite consensus disorder prediction 719 735 - -
Vifa3g03731 852 Pfam IQ calmodulin-binding motif 602 618 IPR000048 GO:0005515
Vifa3g03731 852 Pfam IQ calmodulin-binding motif 532 548 IPR000048 GO:0005515
Vifa3g03731 852 Pfam IQ calmodulin-binding motif 555 571 IPR000048 GO:0005515
Vifa3g03731 852 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 574 IPR027417 -
Vifa3g03731 852 Gene3D - 531 578 - -
Vifa3g03731 852 Gene3D - 579 620 - -
Vifa3g03731 852 Gene3D - 222 416 - -
Vifa3g03731 852 MobiDBLite consensus disorder prediction 717 756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03731 Vifa-Chr3 1094800401 1094807905 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03731 20 850 Myosins gene family AT1G50360 76.351 0.0 1325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03731 - - gmx:100796845 1503.03